RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 PEBP1P30086 187 aaKnown RBP15.77■□□□□ 0.12
SF3A1-209ENST00000496189 DLSTP36957 453 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 PMS2P54278 862 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 PNLIPRP1P54315 467 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 CDKN2DP55273 166 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 CYP2A13Q16696 494 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 CCSMST1Q4G0I0 132 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 PAQR3Q6TCH7 311 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 TIPARPQ7Z3E1 657 aaKnown RBP15.77■□□□□ 0.12
SF3A1-209ENST00000496189 PIWIL4Q7Z3Z4 852 aaKnown RBP15.77■□□□□ 0.12
SF3A1-209ENST00000496189 LMNTD1Q8N9Z9 388 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 DENND1AQ8TEH3 1009 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 SNRNP27Q8WVK2 155 aaKnown RBP15.77■□□□□ 0.12
SF3A1-209ENST00000496189 RBBP8Q99708 897 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 MIPEPQ99797 713 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 MENTQ9BUN1 341 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 ACSS3Q9H6R3 686 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 PCDHGA4Q9Y5G9 962 aa15.77■□□□□ 0.12
SF3A1-209ENST00000496189 TARM1B6A8C7 271 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 GFYI3L273 518 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 PIAS1O75925 651 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 ZNF28P17035 718 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 TCN2P20062 427 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 AGXTP21549 392 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 FDXRP22570 491 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 RPS15P62841 145 aaKnown RBP15.76■□□□□ 0.11
SF3A1-209ENST00000496189 POU4F1Q01851 419 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 TAF1BQ53T94 588 aaPredicted RBP15.76■□□□□ 0.11
SF3A1-209ENST00000496189 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.76■□□□□ 0.11
SF3A1-209ENST00000496189 FIGLAQ6QHK4 219 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 NKAPQ8N5F7 415 aaKnown RBP15.76■□□□□ 0.11
SF3A1-209ENST00000496189 OR1L3Q8NH93 324 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 MR1Q95460 341 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 SLC45A3Q96JT2 553 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 CCDC138Q96M89 665 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 PKP4Q99569 1192 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 ARHGAP9Q9BRR9 750 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 FUT8Q9BYC5 575 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 ANKZF1Q9H8Y5 726 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 PARVBQ9HBI1 364 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 MRPS30Q9NP92 439 aaKnown RBP15.76■□□□□ 0.11
SF3A1-209ENST00000496189 LHX9Q9NQ69 397 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 TXLNGQ9NUQ3 528 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 SRPK3Q9UPE1 567 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 AHCTF1Q8WYP5 2266 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 CELSR3Q9NYQ7 3312 aa15.76■□□□□ 0.11
SF3A1-209ENST00000496189 LOC101059948A0A1B0GTJ6 334 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 C21orf140B9A014 251 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 ERVH48-1M5A8F1 160 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 KATNA1O75449 491 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TIAF1O95411 115 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 SLC16A8O95907 504 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 C1QAP02745 245 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TUBBP07437 444 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 ABHD2P08910 425 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 USP10Q14694 798 aaKnown RBP15.75■□□□□ 0.11
SF3A1-209ENST00000496189 DEFB110Q30KQ9 67 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TCTE1Q5JU00 501 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TLDC1Q6P9B6 456 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 CYHR1Q6ZMK1 362 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TAOK1Q7L7X3 1001 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 OR2L3Q8NG85 312 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 FLVCR1-AS1Q8TAF5 88 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 DLG3Q92796 817 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 RNF31Q96EP0 1072 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 LRFN5Q96NI6 719 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 C17orf62Q9BQA9 187 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 DPH2Q9BQC3 489 aaPredicted RBP15.75■□□□□ 0.11
SF3A1-209ENST00000496189 NDC1Q9BTX1 674 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 ACAT2Q9BWD1 397 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 FAM117AQ9C073 453 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 TWSG1Q9GZX9 223 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 POPDC3Q9HBV1 291 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 ABCF3Q9NUQ8 709 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 ANKMY1Q9P2S6 941 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 CROTQ9UKG9 612 aa15.75■□□□□ 0.11
SF3A1-209ENST00000496189 C9J4A7 227 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ZSCAN9O15535 394 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-209ENST00000496189 INHBAP08476 426 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ENO2P09104 434 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-209ENST00000496189 FAM153BP0C7A2 387 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ERGP11308 486 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 STMN1P16949 149 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 CCND1P24385 295 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 PSMB5P28074 263 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 AP1S2P56377 157 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ABATP80404 500 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 DNASE1L3Q13609 305 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ZIC1Q15915 447 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 UAP1Q16222 522 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-209ENST00000496189 FAM153CQ494X1 144 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 SUSD1Q6UWL2 747 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 CNPY4Q8N129 248 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 DNAJC22Q8N4W6 341 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 TTC29Q8NA56 475 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-209ENST00000496189 OR2A1Q8NGT9 310 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ZNF480Q8WV37 535 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 ATL1Q8WXF7 558 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 STARD8Q92502 1023 aa15.74■□□□□ 0.11
SF3A1-209ENST00000496189 CATSPER2Q96P56 530 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms