RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 OR2L3Q8NG85 312 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 SLC25A23Q9BV35 468 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 EPN3Q9H201 632 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 ANKMY1Q9P2S6 941 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 GALPQ9UBC7 116 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 DHCR7Q9UBM7 475 aaKnown RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 FBXO5Q9UKT4 447 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 G3BP2Q9UN86 482 aaKnown RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 RUVBL2Q9Y230 463 aaKnown RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 KLHL20Q9Y2M5 609 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 DHRS7Q9Y394 339 aa23.25■■□□□ 1.31
HLA-C-209ENST00000495835 ASH1LQ9NR48 2969 aaKnown RBP23.25■■□□□ 1.31
HLA-C-209ENST00000495835 ANKRD12Q6UB98 2062 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 MED13Q9UHV7 2174 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 A0A1B0GX78 115 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 A0A1W2PPV9 198 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 FITM1A5D6W6 292 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 SMAPO00193 183 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 ALBP02768 609 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 CTSBP07858 339 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 C1orf189Q5VU69 101 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 OR2Y1Q8NGV0 311 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 SMPDL3AQ92484 453 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 INPP5DQ92835 1189 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 FKBP10Q96AY3 582 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 PTERQ96BW5 349 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 DDX47Q9H0S4 455 aaKnown RBP23.24■■□□□ 1.31
HLA-C-209ENST00000495835 FBXO6Q9NRD1 293 aaPredicted RBP23.24■■□□□ 1.31
HLA-C-209ENST00000495835 ASIC3Q9UHC3 531 aa23.24■■□□□ 1.31
HLA-C-209ENST00000495835 ARHGEF33A8MVX0 844 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 DNAJB5O75953 348 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 CMPK1P30085 196 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 FOLR3P41439 243 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 SLC1A2P43004 574 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 CCL11P51671 97 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 PGDP52209 483 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 LRRC8EQ6NSJ5 796 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 ZNF549Q6P9A3 640 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 TTC29Q8NA56 475 aaPredicted RBP23.23■■□□□ 1.31
HLA-C-209ENST00000495835 ASB11Q8WXH4 323 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 FAM136AQ96C01 138 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 PDLIM2Q96JY6 352 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 SELENOSQ9BQE4 189 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 TRIM4Q9C037 500 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 MED16Q9Y2X0 877 aa23.23■■□□□ 1.31
HLA-C-209ENST00000495835 CCDC88CQ9P219 2028 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 GFYI3L273 518 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 K7EM74 188 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 DSCR3O14972 297 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 KLHL41O60662 606 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 ALAS2P22557 587 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 SKIV2L2P42285 1042 aaKnown RBP23.22■■□□□ 1.31
HLA-C-209ENST00000495835 RELAQ04206 551 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 HSP90AA5PQ58FG0 334 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.22■■□□□ 1.31
HLA-C-209ENST00000495835 CPZQ66K79 652 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 UGT3A1Q6NUS8 523 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 TTLL10Q6ZVT0 673 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 KCNMB4Q86W47 210 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 FER1L6-AS2Q96M78 137 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 MIPEPQ99797 713 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 EBNA1BP2Q99848 306 aaKnown RBP23.22■■□□□ 1.31
HLA-C-209ENST00000495835 SLC26A1Q9H2B4 701 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 WDR54Q9H977 334 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 CUTCQ9NTM9 273 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 UTP6Q9NYH9 597 aaKnown RBP23.22■■□□□ 1.31
HLA-C-209ENST00000495835 PTRH2Q9Y3E5 179 aaKnown RBP23.22■■□□□ 1.31
HLA-C-209ENST00000495835 ZNF451Q9Y4E5 1061 aa23.22■■□□□ 1.31
HLA-C-209ENST00000495835 OR2A25A4D2G3 310 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 ZBTB14O43829 449 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 HAUS5O94927 633 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 IVDP26440 423 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 CRYMQ14894 314 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 SPANXN3Q5MJ09 141 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 KIAA0408Q6ZU52 694 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 RNF44Q7L0R7 432 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 OVCH1Q7RTY7 1134 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 C2CD4AQ8NCU7 369 aaPredicted RBP23.21■■□□□ 1.31
HLA-C-209ENST00000495835 SLC30A3Q99726 388 aa23.21■■□□□ 1.31
HLA-C-209ENST00000495835 CTSVO60911 334 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 VPS26AO75436 327 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 CCNDBP1O95273 360 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 NR1D1P20393 614 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 PSMB5P28074 263 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 RPA3P35244 121 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-209ENST00000495835 PNLIPRP1P54315 467 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 EMP3P54852 163 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 CHAF1BQ13112 559 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 FASTKQ14296 549 aaKnown RBP23.2■■□□□ 1.3
HLA-C-209ENST00000495835 MORF4L2Q15014 288 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 CYHR1Q6ZMK1 362 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 GALNT7Q86SF2 657 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 CREG2Q8IUH2 290 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 GIMAP7Q8NHV1 300 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 PKP4Q99569 1192 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 ZFYVE21Q9BQ24 234 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 AARSD1Q9BTE6 412 aaKnown RBP23.2■■□□□ 1.3
HLA-C-209ENST00000495835 MRPS30Q9NP92 439 aaKnown RBP23.2■■□□□ 1.3
HLA-C-209ENST00000495835 RNF14Q9UBS8 474 aa23.2■■□□□ 1.3
HLA-C-209ENST00000495835 SAR1BQ9Y6B6 198 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms