RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 IGLV3-25P01717 112 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 APOEP02649 317 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 CTSLP07711 333 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 FAM228BP0C875 321 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 CKMT1AP12532 417 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 KRT10P13645 584 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 PRLRP16471 622 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 ADRA1DP25100 572 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 RENBPP51606 427 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 TMPRSS3P57727 454 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 CLDN2P57739 230 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 YWHAZP63104 245 aaKnown RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 CDR2Q01850 454 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 NSUN2Q08J23 767 aaKnown RBP eCLIP6.43□□□□□ -1.38
VIM-207ENST00000495528 ATP1A4Q13733 1029 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 TAF5Q15542 800 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 DLG2Q15700 870 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 MEA1Q16626 185 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 SETMARQ53H47 684 aaPredicted RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 ZNF542PQ5EBM4 170 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 CCDC122Q5T0U0 273 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 C10orf62Q5T681 223 aaPredicted RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 PIP5KL1Q5T9C9 394 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 DENND2CQ68D51 928 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 FBXL22Q6P050 247 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 DENND1BQ6P3S1 775 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 RAD9BQ6WBX8 426 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 DSG4Q86SJ6 1040 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 VPS36Q86VN1 386 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 KRT73Q86Y46 540 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 DNAAF5Q86Y56 855 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 TMEM139Q8IV31 216 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 RASGRP3Q8IV61 690 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 LSMEM2Q8N112 164 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 SLC22A18ASQ8N1D0 253 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 WDTC1Q8N5D0 677 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 ATP6V0D2Q8N8Y2 350 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 ZNF527Q8NB42 609 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 KCNE4Q8WWG9 221 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 ARRDC3Q96B67 414 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 TRIM44Q96DX7 344 aaPredicted RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 WBP1Q96G27 269 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 PRR11Q96HE9 360 aaPredicted RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 BTN2A3PQ96KV6 586 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 APOLD1Q96LR9 279 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 FEM1AQ9BSK4 669 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 POLR1BQ9H9Y6 1135 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 POPDC2Q9HBU9 364 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 PREBQ9HCU5 417 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 NOCTQ9UK39 431 aaKnown RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 VPS4AQ9UN37 437 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 OR51B4Q9Y5P0 310 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 U3KQA8 63 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 ASH1LQ9NR48 2969 aaKnown RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 MYLKQ15746 1914 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SYNJ2BP-COX16A0A087WUM0 186 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 A0A087WV62 115 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 A0A1W2PNU3 283 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 E5RJQ4 531 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 J3KTA2 159 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 K7ERQ8 282 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ALOX15BO15296 676 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 GP1BAP07359 652 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SRCP12931 536 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 TGM2P21980 687 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 HNRNPA2B1P22626 353 aaKnown RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 SLC5A2P31639 672 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 CYLC1P35663 651 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 MAGEA1P43355 309 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ACADSBP45954 432 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 UCNP55089 124 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ERVPABLB-1P60509 514 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 CCZ1BP86790 482 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 CCZ1P86791 482 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 ZNF177Q13360 481 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 ACOX1Q15067 660 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SPA17Q15506 151 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ASTE1Q2TB18 679 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 ZNF284Q2VY69 593 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 RABGAP1LQ5R372 815 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SEL1L3Q68CR1 1132 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 FCRLBQ6BAA4 426 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ACAD10Q6JQN1 1059 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 NEK5Q6P3R8 708 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 GCNT7Q6ZNI0 430 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 Q6ZSR6 202 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 BCDIN3DQ7Z5W3 292 aaKnown RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 PHLDB2Q86SQ0 1253 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 TMEM110Q86TL2 294 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 HORMAD1Q86X24 394 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ZNF677Q86XU0 584 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 MYLK4Q86YV6 388 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 CCDC170Q8IYT3 715 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 DEFB106AQ8N104 65 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 OR2A12Q8NGT7 310 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 PMM1Q92871 262 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 VCPIP1Q96JH7 1222 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 BMFQ96LC9 184 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms