RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MAGP20916 626 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 GPD1P21695 349 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ASCL1P50553 236 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 NOMO3P69849 1222 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 CETN1Q12798 172 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 SWT1Q5T5J6 900 aaKnown RBP8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ARHGAP11AQ6P4F7 1023 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 TRIM65Q6PJ69 517 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 POMZP3Q6PJE2 187 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 RFX8Q6ZV50 586 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-219ENST00000495172 CCHCR1Q8TD31 782 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ZNF354BQ96LW1 612 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 TTC25Q96NG3 672 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ZNF599Q96NL3 588 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 LYSMD1Q96S90 227 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 PEBP4Q96S96 227 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 TUBGCP2Q9BSJ2 902 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 SARGQ9BW04 601 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 PCDH9Q9HC56 1237 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ZNF304Q9HCX3 659 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 ZNF282Q9UDV7 671 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-219ENST00000495172 EML6Q6ZMW3 1958 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 A0A0J9YY10 115 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 P4HA2O15460 535 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 HSPA9P38646 679 aaKnown RBP8.34□□□□□ -1.07
GARNL3-219ENST00000495172 ITGA8P53708 1063 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 ARSFP54793 590 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 FANCCQ00597 558 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 ACKR1Q16570 336 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 PPP6R3Q5H9R7 873 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-219ENST00000495172 C6orf52Q5T4I8 152 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 MARC1Q5VT66 337 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 H3F3CQ6NXT2 135 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 ARCQ7LC44 396 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 NOP9Q86U38 636 aaKnown RBP8.34□□□□□ -1.07
GARNL3-219ENST00000495172 MEX3DQ86XN8 651 aaKnown RBP8.34□□□□□ -1.07
GARNL3-219ENST00000495172 CFAP206Q8IYR0 622 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 KIF2BQ8N4N8 673 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 TSG101Q99816 390 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 CDCP1Q9H5V8 836 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 TRPC4Q9UBN4 977 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 CIDEBQ9UHD4 219 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
GARNL3-219ENST00000495172 AP4E1Q9UPM8 1137 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 WIF1Q9Y5W5 379 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 COLEC10Q9Y6Z7 277 aa8.34□□□□□ -1.07
GARNL3-219ENST00000495172 LOC102723996A0A087X1L8 192 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 RGSL1A5PLK6 1076 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 PEX1O43933 1283 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 CHRM5P08912 532 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 FBLP22087 321 aaKnown RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 NDUFS1P28331 727 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 PDHA2P29803 388 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 ATP5J2P56134 94 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 VSX2P58304 361 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 OGDHQ02218 1023 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 MEP1AQ16819 746 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 CLEC12BQ2HXU8 276 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 WIPI1Q5MNZ9 446 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 C1orf185Q5T7R7 199 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 MALRD1Q5VYJ5 2156 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 FRMPD2BQ6IN97 320 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 NT5DC3Q86UY8 548 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 TAX1BP1Q86VP1 789 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 TNIP2Q8NFZ5 429 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 ARRDC2Q8TBH0 407 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 CCDC47Q96A33 483 aaKnown RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 SMC6Q96SB8 1091 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 TMEM51Q9NW97 253 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 PCSK1NQ9UHG2 260 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 SPO11Q9Y5K1 396 aa8.33□□□□□ -1.08
GARNL3-219ENST00000495172 YLPM1P49750 1951 aaKnown RBP8.33□□□□□ -1.08
GARNL3-219ENST00000495172 LOC105369274A0A096LPK9 316 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 LOC102723532A0A0G2JNH3 316 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 MGAT4DA6NG13 374 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 ISM1B1AKI9 464 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 ANKRD66B4E2M5 251 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 G3V3Y1 287 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 CES2O00748 559 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 BUD23O43709 281 aaKnown RBP8.32□□□□□ -1.08
GARNL3-219ENST00000495172 SGTAO43765 313 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 SUN1O94901 812 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 YEATS4O95619 227 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 MMP2P08253 660 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 CELA3AP09093 270 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 AMPD1P23109 780 aa8.32□□□□□ -1.08
GARNL3-219ENST00000495172 TPP2P29144 1249 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-219ENST00000495172 DCDC1P59894 354 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms