RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PDAP1Q13442 181 aaKnown RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 TEDDM1Q5T9Z0 273 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 RHBDD2Q6NTF9 364 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 UBE2R2Q712K3 238 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 MCATQ8IVS2 390 aaKnown RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 GPATCH11Q8N954 259 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 OR2L3Q8NG85 312 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 MIPEPQ99797 713 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 NLNQ9BYT8 704 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 SPRTNQ9H040 489 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 GEMIN8Q9NWZ8 242 aaKnown RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 GPN3Q9UHW5 284 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-211ENST00000494800 SNX7Q9UNH6 387 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 KLHL20Q9Y2M5 609 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 E7ESA3 106 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 GFYI3L273 518 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 PRICKLE3O43900 615 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 C8GP07360 202 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 GRIA3P42263 894 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 GABRA4P48169 554 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 KCNAB2Q13303 367 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 SP140Q13342 867 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 YOD1Q5VVQ6 348 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 FAM45BPQ6NSW5 357 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 PIWIL4Q7Z3Z4 852 aaKnown RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF843Q8N446 348 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF655Q8N720 491 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 ENDOVQ8N8Q3 282 aaKnown RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 EXD3Q8N9H8 876 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 TTC29Q8NA56 475 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 OR2A1Q8NGT9 310 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 FAM45AQ8TCE6 357 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 MCOLN3Q8TDD5 553 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 PYROXD1Q8WU10 500 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 THAP4Q8WY91 577 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 PKP4Q99569 1192 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 SELENOSQ9BQE4 189 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 DHRS4Q9BTZ2 278 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 AKIRIN1Q9H9L7 192 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 MRPS30Q9NP92 439 aaKnown RBP16.95■□□□□ 0.3
HDAC4-211ENST00000494800 ANKMY1Q9P2S6 941 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 TUBD1Q9UJT1 453 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 KLK4Q9Y5K2 254 aa16.95■□□□□ 0.3
HDAC4-211ENST00000494800 KRT87PA6NCN2 255 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 EIF3HO15372 352 aaKnown RBP eCLIP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 SRPX2O60687 465 aaPredicted RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 SLC16A8O95907 504 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 HIST1H2AGP0C0S8 130 aaPredicted RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 HIST1H2ADP20671 130 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 PSMB5P28074 263 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 GABRB3P28472 473 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 IL2P60568 153 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 DCDP81605 110 aaKnown RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 FASTKQ14296 549 aaKnown RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 GRM7Q14831 915 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 UGT8Q16880 541 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 PTCHD3Q3KNS1 767 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 ATP1A1-AS1Q5TC04 95 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 FCRL6Q6DN72 434 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 TRMT10BQ6PF06 316 aaKnown RBP16.94■□□□□ 0.3
HDAC4-211ENST00000494800 SLC26A11Q86WA9 606 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 EEF1AKMT1Q8WVE0 214 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 CDKL2Q92772 493 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 HIST1H2AHQ96KK5 128 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 HIST1H2AJQ99878 128 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 H2AFJQ9BTM1 129 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 NDOR1Q9UHB4 597 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 MAN2B2Q9Y2E5 1009 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 VWA7Q9Y334 891 aa16.94■□□□□ 0.3
HDAC4-211ENST00000494800 ATMQ13315 3056 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 A0A1W2PPV9 198 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 TP73O15350 636 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 SLC16A5O15375 505 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 HCRTR1O43613 425 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 C1QL1O75973 258 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 PIM1P11309 404 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 ALAS2P22557 587 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 CDKN2DP55273 166 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 RPS18P62269 152 aaKnown RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 ABATP80404 500 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 CBLBQ13191 982 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 NCF4Q15080 339 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 FAM214AQ32MH5 1076 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 RBM20Q5T481 1227 aaKnown RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 HECTD2Q5U5R9 776 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 C1orf189Q5VU69 101 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 DUPD1Q68J44 220 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 PAQR3Q6TCH7 311 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 SUSD1Q6UWL2 747 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF572Q7Z3I7 529 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 STRA8Q7Z7C7 330 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF480Q8WV37 535 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 LINGO1Q96FE5 620 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms