RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 BPHLQ86WA6 291 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ZFAND4Q86XD8 727 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 PPP1R3BQ86XI6 285 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF248Q8NDW4 579 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 MIPEPQ99797 713 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CHRNA10Q9GZZ6 450 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ATG10Q9H0Y0 220 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ARL15Q9NXU5 204 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 TAC3Q9UHF0 121 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF180Q9UJW8 692 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 RARRES3Q9UL19 164 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CELSR3Q9NYQ7 3312 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 MAP3K7O43318 606 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 HCRTR1O43613 425 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 TIAF1O95411 115 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 GUCA1CO95843 209 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 C2P06681 752 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 MSL3P1P0C860 447 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF28P17035 718 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 TYK2P29597 1187 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 RPA3P35244 121 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 GABRA4P48169 554 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ATP6V0D1P61421 351 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 PRDX1Q06830 199 aaKnown RBP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 NAE1Q13564 534 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 DTX1Q86Y01 620 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 DNAJC22Q8N4W6 341 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 UBLCP1Q8WVY7 318 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 FBXL8Q96CD0 374 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 RNF31Q96EP0 1072 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 IGSF5Q9NSI5 407 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ABCF3Q9NUQ8 709 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 INTS7Q9NVH2 962 aaKnown RBP13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ACOT9Q9Y305 439 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 OARD1Q9Y530 152 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 ACACBO00763 2458 aa13.03□□□□□ -0.32
COL1A1-208ENST00000494334 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.32
COL1A1-208ENST00000494334 A0A096LPK6 155 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 PABPN1LA6NDY0 278 aaKnown RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 SRRM3A6NNA2 597 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TARM1B6A8C7 271 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TMEM150CB9EJG8 249 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 KRT38O76015 456 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 STK17BO94768 372 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 DLGAP3O95886 979 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 LIPCP11150 499 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 CMPK1P30085 196 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 SLC26A3P40879 764 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 MAGEA12P43365 314 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TBPL1P62380 186 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 CDKL1Q00532 357 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 IRF9Q00978 393 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 CLN3Q13286 438 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TGFBIQ15582 683 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TGIF1Q15583 401 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 OR4D1Q15615 310 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 DEFB110Q30KQ9 67 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 ICE2Q659A1 982 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TBC1D1Q86TI0 1168 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 OR8K5Q8NH50 307 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 ISL2Q96A47 359 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 PTERQ96BW5 349 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 NXNL1Q96CM4 212 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 FCRL4Q96PJ5 515 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 SLC6A20Q9NP91 592 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 MRPS30Q9NP92 439 aaKnown RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 CCDC177Q9NQR7 707 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TLK1Q9UKI8 766 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 PILRAQ9UKJ1 303 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-208ENST00000494334 FREM2Q5SZK8 3169 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 APC2O95996 2303 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 FRYQ5TBA9 3013 aa13.02□□□□□ -0.33
COL1A1-208ENST00000494334 A0A087WV48 116 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 A0A087X1B8 175 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms