RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PCDHGA3Q9Y5H0 932 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 ANKRD12Q6UB98 2062 aa12.03□□□□□ -0.48
TRA2A-209ENST00000494255 PCM1Q15154 2024 aa12.02□□□□□ -0.48
TRA2A-209ENST00000494255 ADAMTS20P59510 1910 aa12.02□□□□□ -0.48
TRA2A-209ENST00000494255 A0A096LPK6 155 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 IQANK1A0A1B0GTG1 560 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 A0A1W2PPV9 198 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 E7ENX8 843 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 PRAMEF10O60809 474 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 ALDOAP04075 364 aaKnown RBP12.02□□□□□ -0.49
TRA2A-209ENST00000494255 ANXA5P08758 320 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 FOLR1P15328 257 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 CD1DP15813 335 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 MAGP20916 626 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 CCND1P24385 295 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 CDKL1Q00532 357 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 TAP2Q03519 686 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 IL11RAQ14626 422 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.49
TRA2A-209ENST00000494255 GPSM1Q86YR5 675 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 OR2L3Q8NG85 312 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 OR2A1Q8NGT9 310 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 FGF11Q92914 225 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 CAVIN3Q969G5 261 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 KIAA1191Q96A73 305 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 FBXL8Q96CD0 374 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 MTBPQ96DY7 904 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 MED8Q96G25 268 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 CTRCQ99895 268 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 PCBD2Q9H0N5 130 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 ATG10Q9H0Y0 220 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 MRPS30Q9NP92 439 aaKnown RBP12.02□□□□□ -0.49
TRA2A-209ENST00000494255 FGF21Q9NSA1 209 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 TAC3Q9UHF0 121 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 RARRES3Q9UL19 164 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 RAB21Q9UL25 225 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 RNF112Q9ULX5 631 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 B3GALT1Q9Y5Z6 326 aa12.02□□□□□ -0.49
TRA2A-209ENST00000494255 C9orf172C9J069 976 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 S100BP04271 92 aaPredicted RBP12.01□□□□□ -0.49
TRA2A-209ENST00000494255 TFEBP19484 476 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 GCAP28676 217 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 HSD17B3P37058 310 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 PCBP4P57723 403 aaKnown RBP12.01□□□□□ -0.49
TRA2A-209ENST00000494255 TBPL1P62380 186 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 NAE1Q13564 534 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 GPR19Q15760 415 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 PPP1R3AQ16821 1122 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 CAPN13Q6MZZ7 669 aaPredicted RBP12.01□□□□□ -0.49
TRA2A-209ENST00000494255 KLC3Q6P597 504 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 FIGLAQ6QHK4 219 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 PPP1R3BQ86XI6 285 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 FAM20CQ8IXL6 584 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 OR8K5Q8NH50 307 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 ISL2Q96A47 359 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 ZUFSPQ96AP4 578 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
TRA2A-209ENST00000494255 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 APMAPQ9HDC9 416 aa12.01□□□□□ -0.49
TRA2A-209ENST00000494255 SNRNP200O75643 2136 aaKnown RBP12.01□□□□□ -0.49
TRA2A-209ENST00000494255 CCDC189A1A4V9 331 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 TARM1B6A8C7 271 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 KLHL2O95198 593 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SHBGP04278 402 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CD82P27701 267 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 GMPRP36959 345 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 GRIA3P42263 894 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 HNMTP50135 292 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 ABATP80404 500 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 IRF9Q00978 393 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 ZIC1Q15915 447 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 PRAMEF13Q5VWM6 474 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 ICE2Q659A1 982 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CDHR3Q6ZTQ4 885 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 LRRC56Q8IYG6 542 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 CENPLQ8N0S6 344 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 STAG3L4Q8TBR4 150 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 NXNL1Q96CM4 212 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CABS1Q96KC9 395 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CHRNA10Q9GZZ6 450 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 ALG9Q9H6U8 611 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 IGSF5Q9NSI5 407 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CD274Q9NZQ7 290 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 FOXJ2Q9P0K8 574 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SERTAD3Q9UJW9 196 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 KLHL20Q9Y2M5 609 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 NCF1BA6NI72 391 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 SMIM23A6NLE4 172 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 NCF1CA8MVU1 366 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 TMEM150CB9EJG8 249 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 MSL3P1P0C860 447 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 FGF5P12034 268 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 NCF1P14598 390 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 MAGEA12P43365 314 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CSRP3P50461 194 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 PRDX1Q06830 199 aaKnown RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 IFFO1Q0D2I5 559 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms