RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DCTN2Q13561 401 aaKnown RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 IMPG1Q17R60 797 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 SMU1Q2TAY7 513 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 ZNF284Q2VY69 593 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 ZNF648Q5T619 568 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 NANOGP8Q6NSW7 305 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 RGL4Q8IZJ4 473 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 C12orf76Q8N812 135 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 TIFAQ96CG3 184 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 SPOCK3Q9BQ16 436 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 NANOGQ9H9S0 305 aa13.41□□□□□ -0.26
VCP-207ENST00000493886 NUP214P35658 2090 aaPredicted RBP13.41□□□□□ -0.26
VCP-207ENST00000493886 SLC16A5O15375 505 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 CLOCKO15516 846 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 TULP3O75386 442 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ADH1CP00326 375 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 CYP2A7P20853 494 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 GNPDA1P46926 289 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ST8SIA6P61647 398 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 NEDD8Q15843 81 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ADRM1Q16186 407 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 CPSF6Q16630 551 aaKnown RBP eCLIP13.4□□□□□ -0.26
VCP-207ENST00000493886 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 TECPR1Q7Z6L1 1165 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 HCAR2Q8TDS4 363 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 GIMAP1Q8WWP7 306 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 QPCTLQ9NXS2 382 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 CHD7Q9P2D1 2997 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 OR2AG2A6NM03 316 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 H0YJX3 145 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ARNTLO00327 626 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 B4GAT1O43505 415 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 SNAP29O95721 258 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 KRT6AP02538 564 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 FTH1P02794 183 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 KRT6BP04259 564 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 DDX5P17844 614 aaKnown RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 MMP12P39900 470 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 KRT6CP48668 564 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ENTPD1P49961 510 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 HNMTP50135 292 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 DGKQP52824 942 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 EMP3P54852 163 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 EEFSECP57772 596 aaKnown RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 PTGR1Q14914 329 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 ESX1Q8N693 406 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 BTN2A2Q8WVV5 523 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 ISOC1Q96CN7 298 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 MTFMTQ96DP5 389 aaKnown RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 P2RY13Q9BPV8 354 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 MUC13Q9H3R2 512 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 TPK1Q9H3S4 243 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 LRTM1Q9HBL6 345 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
VCP-207ENST00000493886 SLC27A6Q9Y2P4 619 aa13.4□□□□□ -0.26
VCP-207ENST00000493886 SEC22BO75396 215 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 OXSR1O95747 527 aaPredicted RBP13.4□□□□□ -0.27
VCP-207ENST00000493886 ELFN1P0C7U0 828 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 SLC6A12P48065 614 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 LBX1P52954 281 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 DLEU7Q6UYE1 221 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 ADGRD2Q7Z7M1 963 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 HID1Q8IV36 788 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 MCOLN3Q8TDD5 553 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 ASZ1Q8WWH4 475 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 PYCR2Q96C36 320 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.27
VCP-207ENST00000493886 PPM1MQ96MI6 270 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 ZFP14Q9HCL3 533 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 MOSPD1Q9UJG1 213 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 FADS3Q9Y5Q0 445 aa13.4□□□□□ -0.27
VCP-207ENST00000493886 MAGED1Q9Y5V3 778 aaPredicted RBP13.4□□□□□ -0.27
VCP-207ENST00000493886 NUP210Q8TEM1 1887 aaPredicted RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 KPNA3O00505 521 aaPredicted RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 AP1S2P56377 157 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 MTPNP58546 118 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 MESP2Q0VG99 397 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 GRIN2CQ14957 1233 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 KIAA0040Q15053 153 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 GPR107Q5VW38 600 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 TMC5Q6UXY8 1006 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 PTRH1Q86Y79 214 aaKnown RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 GRAMD2AQ8IUY3 354 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 LIX1Q8N485 282 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 CENPNQ96H22 339 aaPredicted RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 RNF145Q96MT1 663 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ZBTB18Q99592 522 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 MTIF3Q9H2K0 278 aaKnown RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 RPF2Q9H7B2 306 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms