RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 VPS39Q96JC1 886 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 PKP4Q99569 1192 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 MIPEPQ99797 713 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 ACAT2Q9BWD1 397 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 PITPNM3Q9BZ71 974 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 MOCS1Q9NZB8 636 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SPATA7Q9P0W8 599 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SEMA5BQ9P283 1151 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 DMGDHQ9UI17 866 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 TCRBV9S1A1TA0A576 114 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZNF839A8K0R7 811 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 CXorf49A8MYA2 514 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SCRG1O75711 98 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 TIAF1O95411 115 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 RHOXF2BP0C7M4 288 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SFTPCP11686 197 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 FGF5P12034 268 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZNF28P17035 718 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 MAGP20916 626 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PSMB5P28074 263 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 OAS2P29728 719 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 STX2P32856 288 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 RPA3P35244 121 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 GPX6P59796 221 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 FASTKQ14296 549 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 DEFB110Q30KQ9 67 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SDK2Q58EX2 2172 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 THEMIS2Q5TEJ8 643 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PWWP2BQ6NUJ5 590 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SUSD1Q6UWL2 747 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 C6orf15Q6UXA7 325 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 CEP128Q6ZU80 1094 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PPM1NQ8N819 430 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 MCOLN3Q8TDD5 553 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SMPDL3AQ92484 453 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 NKD1Q969G9 470 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 CLIP3Q96DZ5 547 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 TCTN2Q96GX1 697 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 FMO2Q99518 471 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 OLFM1Q99784 485 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 RHOXF2Q9BQY4 288 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ARHGAP9Q9BRR9 750 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 TRIM54Q9BYV2 358 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PHACTR1Q9C0D0 580 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 RHOJQ9H4E5 214 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SMYD2Q9NRG4 433 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZDHHC18Q9NUE0 388 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 INTS7Q9NVH2 962 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 GEMIN8Q9NWZ8 242 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 SERTAD3Q9UJW9 196 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 PILRAQ9UKJ1 303 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 BTRCQ9Y297 605 aa10.03□□□□□ -0.8
TRAPPC12-222ENST00000493792 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 C8GP07360 202 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 HIST1H2AGP0C0S8 130 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 HIST1H2ADP20671 130 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 FDXRP22570 491 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CMPK1P30085 196 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 PHBP35232 272 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 GP5P40197 560 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 PNLIPRP1P54315 467 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 ITGA1P56199 1179 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 TAS2R39P59534 338 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CYP4F2P78329 520 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 TIAL1Q01085 375 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 ZNF460Q14592 562 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 USP10Q14694 798 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 ZIC1Q15915 447 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 UAP1Q16222 522 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 KBTBD12Q3ZCT8 623 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 C4orf17Q53FE4 359 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 PRAMEF17Q5VTA0 474 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 FIGLAQ6QHK4 219 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CYHR1Q6ZMK1 362 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CDHR3Q6ZTQ4 885 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 TIPARPQ7Z3E1 657 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 GPR135Q8IZ08 494 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 ESX1Q8N693 406 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 OR8K5Q8NH50 307 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 OR1L3Q8NH93 324 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 DENND1AQ8TEH3 1009 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 ZNF501Q96CX3 271 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 HIST1H2AHQ96KK5 128 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 CPNE1Q99829 537 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 HIST1H2AJQ99878 128 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 H2AFJQ9BTM1 129 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 GPN2Q9H9Y4 310 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 LRRC4CQ9HCJ2 640 aa10.02□□□□□ -0.81
TRAPPC12-222ENST00000493792 FAM60AQ9NP50 221 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms