RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CEP57Q86XR8 500 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 FBXL16Q8N461 479 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ZCCHC9Q8N567 271 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM105Q8N8V8 129 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ADAD2Q8NCV1 583 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 VPS37AQ8NEZ2 397 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 CCDC12Q8WUD4 166 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PSPC1Q8WXF1 523 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 MRPS27Q92552 414 aaKnown RBP3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF524Q96C55 264 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 ERLEC1Q96DZ1 483 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 C17orf77Q96MU5 243 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 KLHL5Q96PQ7 755 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 MYADMQ96S97 322 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 RIT2Q99578 217 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PANK2Q9BZ23 570 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM117Q9H0C3 514 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 S1PR5Q9H228 398 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 MAGEE1Q9HCI5 957 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SH3GLB2Q9NR46 395 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SNTG1Q9NSN8 517 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM160Q9NX00 188 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 PEMTQ9UBM1 199 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 DAAM1Q9Y4D1 1078 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 CLIC4Q9Y696 253 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 OTOGLQ3ZCN5 2332 aa3.01□□□□□ -1.93
PTCD3-218ENST00000493430 MAP1BP46821 2468 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 CEP250Q9BV73 2442 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ARHGEF35A5YM69 484 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 GOLGA8IPA6NC78 632 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 GOLGA8JA6NMD2 632 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CCDC169A6NNP5 214 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 IFRD1O00458 451 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 BCAT2O15382 392 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 TEX28O15482 410 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 KLK10O43240 276 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF500O60304 480 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 WDR1O75083 606 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ERLIN2O94905 339 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 SEC24AO95486 1093 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CXCL14O95715 111 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 LDHAP00338 332 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 INHBAP08476 426 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 STAG3L1P0CL83 205 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CXCL8P10145 99 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 MYOD1P15172 320 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 U2AF2P26368 475 aaKnown RBP eCLIP3□□□□□ -1.931e-10■□□□□ 9.8
PTCD3-218ENST00000493430 KRTAP5-9P26371 169 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 NMT1P30419 496 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 SFNP31947 248 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 DDIT3P35638 169 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CCR2P41597 374 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 HNRNPH2P55795 449 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 PTENP60484 403 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 GTF2H2Q13888 395 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 SGO1Q5FBB7 561 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM31Q5JXX7 168 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 SDHAF4Q5VUM1 108 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 GTF2H2CQ6P1K8 395 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 FUT10Q6P4F1 479 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 KCTD18Q6PI47 426 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 CPLX2Q6PUV4 134 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 ADGRG6Q86SQ4 1221 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 C4orf19Q8IY42 314 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 PDILTQ8N807 584 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 FAM184AQ8NB25 1140 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ITFG1Q8TB96 612 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 NOC3LQ8WTT2 800 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF707Q96C28 371 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 TCEAL4Q96EI5 215 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 EPSTI1Q96J88 318 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CCDC43Q96MW1 224 aaKnown RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 SH3GL2Q99962 352 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 HSD17B14Q9BPX1 270 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 REEP2Q9BRK0 252 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 POLR3CQ9BUI4 534 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 GCOM2Q9BZD3 368 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 PLA2G2FQ9BZM2 168 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 KCNN2Q9H2S1 579 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ZHX3Q9H4I2 956 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 ZDHHC4Q9NPG8 344 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 NRBP2Q9NSY0 501 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 BLOC1S4Q9NUP1 217 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 C2orf42Q9NWW7 574 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 SPG21Q9NZD8 308 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 KIAA1456Q9P272 454 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 CTNNAL1Q9UBT7 734 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 FBXO9Q9UK97 447 aaPredicted RBP3□□□□□ -1.93
PTCD3-218ENST00000493430 NME7Q9Y5B8 376 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 A0A0C4DFX4 3053 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
PTCD3-218ENST00000493430 COL27A1Q8IZC6 1860 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF106Q9H2Y7 1883 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM202A6NGA9 273 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM221A6NGB7 291 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 HMGB1P1B2RPK0 211 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 LOC730098B7Z3J9 87 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 PI4K2BG5E9Z4 385 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 BLOC1S5-TXNDC5H3BN57 136 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms