RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PRICKLE3O43900 615 aaPredicted RBP20.49■□□□□ 0.87
PFDN4-205ENST00000493356 GPC4O75487 556 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 USP1O94782 785 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 TJP3O95049 919 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ZGLP1P0C6A0 271 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 SOX11P35716 441 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 TNFSF10P50591 281 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 VSX2P58304 361 aaPredicted RBP20.49■□□□□ 0.87
PFDN4-205ENST00000493356 INAQ16352 499 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ZXDCQ2QGD7 858 aaPredicted RBP20.49■□□□□ 0.87
PFDN4-205ENST00000493356 WASHC2DQ5SRD0 308 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ATG9BQ674R7 924 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 UNC5DQ6UXZ4 953 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 PRSS58Q8IYP2 241 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 FAM71DQ8N9W8 422 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 OR13J1Q8NGT2 312 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 LKAAEAR1Q8TD35 194 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ASZ1Q8WWH4 475 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ZUFSPQ96AP4 578 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 ZNF304Q9HCX3 659 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 PLA2G3Q9NZ20 509 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 PTGFRNQ9P2B2 879 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 C3orf18Q9UK00 162 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 PCDHA13Q9Y5I0 950 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 HIVEP1P15822 2718 aa20.49■□□□□ 0.87
PFDN4-205ENST00000493356 CPAMD8Q8IZJ3 1885 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 TRAV17A0A0B4J275 112 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 TARM1B6A8C7 271 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 F8W8V4 182 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 SRPX2O60687 465 aaPredicted RBP20.48■□□□□ 0.87
PFDN4-205ENST00000493356 FKBP9O95302 570 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 OCA2Q04671 838 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 FRMPD2BQ6IN97 320 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 GFRALQ6UXV0 394 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 GDF7Q7Z4P5 450 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 BRIX1Q8TDN6 353 aaKnown RBP20.48■□□□□ 0.87
PFDN4-205ENST00000493356 HDAC10Q969S8 669 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 MIEF2Q96C03 454 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 ZNF282Q9UDV7 671 aaPredicted RBP20.48■□□□□ 0.87
PFDN4-205ENST00000493356 SLC39A10Q9ULF5 831 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 SETD2Q9BYW2 2564 aaPredicted RBP20.48■□□□□ 0.87
PFDN4-205ENST00000493356 PCNX1Q96RV3 2341 aa20.48■□□□□ 0.87
PFDN4-205ENST00000493356 NSG1A0A0A6YYJ2 146 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 GOT2P00505 430 aaKnown RBP20.47■□□□□ 0.87
PFDN4-205ENST00000493356 PRR35P0CG20 571 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 COX6A1P12074 109 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 PTGER4P35408 488 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 RWDD2BP57060 319 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 TBX2Q13207 712 aaPredicted RBP20.47■□□□□ 0.87
PFDN4-205ENST00000493356 P3H1Q32P28 736 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 PRMT9Q6P2P2 845 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 AFTPHQ6ULP2 937 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 ALG3Q92685 438 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 HAS2Q92819 552 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 CCDC120Q96HB5 630 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 TTC1Q99614 292 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 SUCOQ9UBS9 1254 aaKnown RBP20.47■□□□□ 0.87
PFDN4-205ENST00000493356 FAM169AQ9Y6X4 670 aa20.47■□□□□ 0.87
PFDN4-205ENST00000493356 IGLV3-12A0A075B6K2 115 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 TRGV8A0A0C4DH27 118 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 IQCF5A8MTL0 148 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 PSMD3O43242 534 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 APOA4P06727 396 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 FDXRP22570 491 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 CETN2P41208 172 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 GDF10P55107 478 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 VWA2Q5GFL6 755 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 BNC2Q6ZN30 1099 aaPredicted RBP20.46■□□□□ 0.87
PFDN4-205ENST00000493356 NDUFAF7Q7L592 441 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 MRGPRGQ86SM5 289 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 LAPTM4BQ86VI4 370 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 TAB3Q8N5C8 712 aaPredicted RBP20.46■□□□□ 0.87
PFDN4-205ENST00000493356 SIRT6Q8N6T7 355 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 OR52K1Q8NGK4 314 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 CARD6Q9BX69 1037 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 TSSK1BQ9BXA7 367 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 RAB11FIP5Q9BXF6 653 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 SLC2A6Q9UGQ3 507 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 ZC3H7BQ9UGR2 993 aaKnown RBP20.46■□□□□ 0.87
PFDN4-205ENST00000493356 KLK4Q9Y5K2 254 aa20.46■□□□□ 0.87
PFDN4-205ENST00000493356 LOC105369274A0A096LPK9 316 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 LOC102723532A0A0G2JNH3 316 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 A0A0J9YVX5 310 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 A0A1W2PQ72 361 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 NRP2O60462 931 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 SLCO2B1O94956 709 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 UNC5CO95185 931 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 SERPINA7P05543 415 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 PSMB5P28074 263 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 SEMA3AQ14563 771 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 TMEM207Q6UWW9 146 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 ZNF534Q76KX8 674 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 LINC00523Q86TU6 105 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 OR4N4Q8N0Y3 316 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 ZNF808Q8N4W9 903 aaPredicted RBP20.45■□□□□ 0.86
PFDN4-205ENST00000493356 LURAP1Q96LR2 239 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 MIPEPQ99797 713 aa20.45■□□□□ 0.86
PFDN4-205ENST00000493356 STOX2Q9P2F5 926 aaPredicted RBP20.45■□□□□ 0.86
PFDN4-205ENST00000493356 CCL21O00585 134 aa20.44■□□□□ 0.86
PFDN4-205ENST00000493356 F10P00742 488 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms