RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DHDDSQ86SQ9 333 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 SYTL1Q8IYJ3 562 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 LIX1Q8N485 282 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 METTL2AQ96IZ6 378 aaKnown RBP13.62□□□□□ -0.23
PTPN7-216ENST00000492977 SLC39A3Q9BRY0 314 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 SGPP1Q9BX95 441 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 SLC17A9Q9BYT1 436 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 DPY30Q9C005 99 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 FZD4Q9ULV1 537 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 PCDHA9Q9Y5H5 950 aa13.62□□□□□ -0.23
PTPN7-216ENST00000492977 COL4A2P08572 1712 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 TMEM265A0A087WTH1 108 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 A0A1W2PQU0 124 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 H3BNX3 289 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 NME4O00746 187 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 RNGTTO60942 597 aaKnown RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 STAMBPO95630 424 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 RPN2P04844 631 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 IL6P05231 212 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 MYCLP1P12525 358 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 BCKDHAP12694 445 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 GLULP15104 373 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 CD22P20273 847 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 COL9A1P20849 921 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 ADPRHP54922 357 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 CMPK2Q5EBM0 449 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 C10orf62Q5T681 223 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 COL13A1Q5TAT6 717 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 ICE2Q659A1 982 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 HORMAD1Q86X24 394 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 SLC44A3Q8N4M1 653 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 FAM156AQ8NDB6 213 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 SETD7Q8WTS6 366 aaKnown RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 ASB12Q8WXK4 309 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 RAD51AP1Q96B01 352 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 SLC45A3Q96JT2 553 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 CLMPQ9H6B4 373 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 RMI1Q9H9A7 625 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 BRF2Q9HAW0 419 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 CMTM6Q9NX76 183 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 C6orf203Q9P0P8 240 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 SLC23A2Q9UGH3 650 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 NCKAP1Q9Y2A7 1128 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 PRKAB1Q9Y478 270 aa13.61□□□□□ -0.23
PTPN7-216ENST00000492977 PCYT1BQ9Y5K3 369 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-216ENST00000492977 F5P12259 2224 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 KCNJ13O60928 360 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 NPPBP16860 134 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 KELP23276 732 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 CLNS1AP54105 237 aaKnown RBP13.6□□□□□ -0.23
PTPN7-216ENST00000492977 CLDN8P56748 225 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 TBPL1P62380 186 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 DMPKQ09013 629 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 BNIP2Q12982 314 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 CAPRIN1Q14444 709 aaKnown RBP13.6□□□□□ -0.23
PTPN7-216ENST00000492977 PTGR1Q14914 329 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 NUMA1Q14980 2115 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 MUM1Q2TAK8 710 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 SUSD1Q6UWL2 747 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 SLCO4C1Q6ZQN7 724 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 HID1Q8IV36 788 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 DCUN1D3Q8IWE4 304 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 LRRC56Q8IYG6 542 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-216ENST00000492977 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 TFGQ92734 400 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-216ENST00000492977 ZUFSPQ96AP4 578 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 REPS1Q96D71 796 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 WDR34Q96EX3 536 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 SIPA1Q96FS4 1042 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 VCX3BQ9H321 246 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 MUC13Q9H3R2 512 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 EHD1Q9H4M9 534 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 KCNK12Q9HB15 430 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-216ENST00000492977 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 DYRK1BQ9Y463 629 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 OR1A2Q9Y585 309 aa13.6□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3DA0A087WVF3 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3IA0A087WXS9 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3EA0A087X179 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3KA0A087X1G2 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3FA6NER0 549 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3LB9A6J9 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 PI15O43692 258 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 C8BP07358 591 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3HP0C7X1 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 AMD1P17707 334 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms