RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 OR2B3O76000 313 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 TSPAN12O95859 305 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SLC16A8O95907 504 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SYF2O95926 243 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 NTRK1P04629 796 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 KLK3P07288 261 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 HBQ1P09105 142 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF37AP17032 561 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 CMPK1P30085 196 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 RPA3P35244 121 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 DLSTP36957 453 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 GP5P40197 560 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 GPX6P59796 221 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 MC1RQ01726 317 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 TAP2Q03519 686 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 NAB1Q13506 487 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 FASTKQ14296 549 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZC3H12BQ5HYM0 836 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 KIAA1614Q5VZ46 1190 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 DNAJC22Q8N4W6 341 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 NKAPQ8N5F7 415 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 LSM14AQ8ND56 463 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF480Q8WV37 535 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 CLIP3Q96DZ5 547 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 PDLIM5Q96HC4 596 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 CCDC138Q96M89 665 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 RBBP8Q99708 897 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 MIPEPQ99797 713 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 DPH2Q9BQC3 489 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SLC7A5P2Q9GIP4 190 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 ACTR5Q9H9F9 607 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 LRRC4CQ9HCJ2 640 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 DMGDHQ9UI17 866 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 KCND3Q9UK17 655 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 PCDHGA6Q9Y5G7 932 aa10.25□□□□□ -0.77
CDC42SE1-206ENST00000492796 H3BMH7 237 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZSCAN9O15535 394 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 C1QAP02745 245 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ITGB2P05107 769 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ENO2P09104 434 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 HIST1H2AGP0C0S8 130 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 HIST1H2ADP20671 130 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 CCND1P24385 295 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 PSMB5P28074 263 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 IMPA1P29218 277 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 PHBP35232 272 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 RORAP35398 523 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 GRIA3P42263 894 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 SLC12A2P55011 1212 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 AP1S2P56377 157 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ABATP80404 500 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 POU4F1Q01851 419 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 GPS2Q13227 327 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 DNASE1L3Q13609 305 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 DEFB110Q30KQ9 67 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ICE2Q659A1 982 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 FCRL6Q6DN72 434 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 TLDC1Q6P9B6 456 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 FIGLAQ6QHK4 219 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF517Q6ZMY9 492 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 RNF44Q7L0R7 432 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 RELL1Q8IUW5 271 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 FAM20CQ8IXL6 584 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 LRRC56Q8IYG6 542 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 DSELQ8IZU8 1212 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 STARD8Q92502 1023 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ANKRD7Q92527 254 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 TSPAN17Q96FV3 270 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 HIST1H2AHQ96KK5 128 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 FMO2Q99518 471 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 GPR22Q99680 433 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 HIST1H2AJQ99878 128 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 H2AFJQ9BTM1 129 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 TRIM54Q9BYV2 358 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 PCBD2Q9H0N5 130 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 MRPS30Q9NP92 439 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 CCDC177Q9NQR7 707 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ENAMQ9NRM1 1142 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 PCMTD2Q9NV79 361 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 STOX2Q9P2F5 926 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 CROTQ9UKG9 612 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 ADAMTS6Q9UKP5 1117 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 PDE10AQ9Y233 779 aa10.24□□□□□ -0.77
CDC42SE1-206ENST00000492796 OR2A25A4D2G3 310 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 CXorf49A8MYA2 514 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 MEN1O00255 615 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF749O43361 778 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 HCRTR1O43613 425 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SRPX2O60687 465 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 RECKO95980 971 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms