RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 C19orf47Q8N9M1 422 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 LPGAT1Q92604 370 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 IL17FQ96PD4 163 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 CHRNA10Q9GZZ6 450 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 CDC42EP4Q9H3Q1 356 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 ACTR5Q9H9F9 607 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 SYTL2Q9HCH5 934 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 LRRC4CQ9HCJ2 640 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 NINJ2Q9NZG7 142 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 GALPQ9UBC7 116 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 TLK1Q9UKI8 766 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 RUVBL2Q9Y230 463 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 FARSAQ9Y285 508 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 A0A0J9YY10 115 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 ZNF749O43361 778 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 ERLIN1O75477 346 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 APOA4P06727 396 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 RAB40ALP0C0E4 278 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 OGNP20774 298 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CYP2A7P20853 494 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CD9P21926 228 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 GCGRP47871 477 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 RAB28P51157 221 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 ITGA1P56199 1179 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CTBP1Q13363 440 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TYSND1Q2T9J0 566 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 UNC5DQ6UXZ4 953 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 SYVN1Q86TM6 617 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 RELL1Q8IUW5 271 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 APLFQ8IW19 511 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 SYTL1Q8IYJ3 562 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 C2orf73Q8N5S3 287 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CFAP61Q8NHU2 1237 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 FBF1Q8TES7 1133 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CLIP3Q96DZ5 547 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TCTN2Q96GX1 697 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TCF12Q99081 682 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 NLNQ9BYT8 704 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 EPN3Q9H201 632 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 FANCEQ9HB96 536 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 SERTAD3Q9UJW9 196 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 FBXO5Q9UKT4 447 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TP53TG5Q9Y2B4 290 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
SEC61A1-206ENST00000491668 TCRBV9S1A1TA0A576 114 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 E7EQ34 232 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 NIPSNAP2O75323 286 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 KLF7O75840 302 aaPredicted RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 OR2B3O76000 313 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 KLK3P07288 261 aaPredicted RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 CBSLP0DN79 551 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 MAGP20916 626 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 CBSP35520 551 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 SLC1A2P43004 574 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 FOXL2P58012 376 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 GPX6P59796 221 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 RPS15P62841 145 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 TLE1Q04724 770 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 CHAF1BQ13112 559 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 FRG1Q14331 258 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 GBX1Q14549 363 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 KIR2DS3Q14952 304 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 SLC5A12Q1EHB4 618 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 EMBQ6PCB8 327 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 DCUN1D3Q8IWE4 304 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 DENND6AQ8IWF6 608 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 MYRIPQ8NFW9 859 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 UHMK1Q8TAS1 419 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 DENND1AQ8TEH3 1009 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 TSSK1BQ9BXA7 367 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 FBXO6Q9NRD1 293 aaPredicted RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 INTS10Q9NVR2 710 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 NSMCE4AQ9NXX6 385 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 TCFL5Q9UL49 500 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 MAN2B2Q9Y2E5 1009 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 MED16Q9Y2X0 877 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 IKBKGQ9Y6K9 419 aa12.21□□□□□ -0.45
SEC61A1-206ENST00000491668 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.46
SEC61A1-206ENST00000491668 A0A087WUV0 522 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 RFPL1O75677 317 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 C1orf105O95561 183 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 S1PR4O95977 384 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 ITGAXP20702 1163 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 FMO4P31512 558 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 BDKRB1P46663 353 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CSRP3P50461 194 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 YBX1P67809 324 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms