RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 RBBP7Q16576 425 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 SLC5A12Q1EHB4 618 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 GOLGA7Q7Z5G4 137 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 SFTPA2Q8IWL1 248 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 LINC01555Q8NAE3 123 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 PPFIBP2Q8ND30 876 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 RHBDD1Q8TEB9 315 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 ATP6V1E2Q96A05 226 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
SNX12-205ENST00000490561 CNDP2Q96KP4 475 aaKnown RBP12.8□□□□□ -0.36
SNX12-205ENST00000490561 ZNF382Q96SR6 550 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 CDC6Q99741 560 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 EHD1Q9H4M9 534 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 PARD6AQ9NPB6 346 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 INTS7Q9NVH2 962 aaKnown RBP12.8□□□□□ -0.36
SNX12-205ENST00000490561 HRASLS2Q9NWW9 162 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 FTSJ1Q9UET6 329 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 SLC22A14Q9Y267 594 aa12.8□□□□□ -0.36
SNX12-205ENST00000490561 TDRD6O60522 2096 aaKnown RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 KRT87PA6NCN2 255 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ISM1B1AKI9 464 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 PRICKLE3O43900 615 aaPredicted RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 SNNO75324 88 aaPredicted RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 GP1BAP07359 652 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CD59P13987 128 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CKMT2P17540 419 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 TGM1P22735 817 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CXCR2P25025 360 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 GDF5P43026 501 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 LIMK1P53667 647 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 PRDX1Q06830 199 aaKnown RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 BST1Q10588 318 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 LAPTM5Q13571 262 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 FASTKQ14296 549 aaKnown RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 TBCCQ15814 346 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 ICE2Q659A1 982 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ZCCHC23Q6ZST2 131 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 EFL1Q7Z2Z2 1120 aaKnown RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 NAXDQ8IW45 347 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CARFQ8N187 725 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 LMNTD1Q8N9Z9 388 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 WDR48Q8TAF3 677 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 TRPC4APQ8TEL6 797 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CCDC74AQ96AQ1 378 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 GRAMD1AQ96CP6 724 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ZDHHC12Q96GR4 267 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 C7orf26Q96N11 449 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 CD180Q99467 661 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 NTMT1Q9BV86 223 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 PITPNM3Q9BZ71 974 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 PITHD1Q9GZP4 211 aaPredicted RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 NOL11Q9H8H0 719 aaKnown RBP12.79□□□□□ -0.36
SNX12-205ENST00000490561 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ACTR10Q9NZ32 417 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ANKMY1Q9P2S6 941 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 EPHA6Q9UF33 1036 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 ADAMTS9Q9P2N4 1935 aa12.79□□□□□ -0.36
SNX12-205ENST00000490561 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 IGHV1OR21-1A0A087WYE8 117 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 LY6G6EA0A0G2JKS1 128 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 GSAPA4D1B5 854 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SRRM3A6NNA2 597 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 BTN3A3O00478 584 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 CRCPO75575 148 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 CLDN9O95484 217 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ENO1P06733 434 aaKnown RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 EBLN1P0CF75 366 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 NPPBP16860 134 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 ACP1P24666 158 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ALDH4A1P30038 563 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 HNF4AP41235 474 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 CASP2P42575 452 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 HK2P52789 917 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 NHLH1Q02575 133 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SQSTM1Q13501 440 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 ZXDCQ2QGD7 858 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 FBXO48Q5FWF7 155 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 PAGE2BQ5JRK9 111 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 LIPJQ5W064 366 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ATG9BQ674R7 924 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SUSD1Q6UWL2 747 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms