RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 EEF1GP26641 437 aaKnown RBP12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 GJC1P36383 396 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 PMPCAQ10713 525 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 SLC14A2Q15849 920 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 SIRPB2Q5JXA9 342 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 PPP1R2P3Q6NXS1 205 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 CIARTQ8N365 385 aaPredicted RBP12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 TMEM178AQ8NBL3 297 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 DCUN1D1Q96GG9 259 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF285Q96NJ3 590 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 SELENOSQ9BQE4 189 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 ASB8Q9H765 288 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 MKL2Q9ULH7 1088 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
EXOSC3-207ENST00000490516 CHD3Q12873 2000 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 LOC102723996A0A087X1L8 192 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 HYKKA2RU49 373 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 RNF212BA8MTL3 300 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 RASGRF2O14827 1237 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 MAN1A2O60476 641 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 HEXBP07686 556 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 ICAM2P13598 275 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 FBLP22087 321 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 SSR1P43307 286 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 EFNA3P52797 238 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 NUP107P57740 925 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 AP2B1P63010 937 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 PPP2R2BQ00005 443 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 AP1B1Q10567 949 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 KEAP1Q14145 624 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 KIR2DS3Q14952 304 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 WASHC2DQ5SRD0 308 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 ARSKQ6UWY0 536 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 IRF2BP2Q7Z5L9 587 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 TMTC1Q8IUR5 882 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM98AQ8NCA5 519 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 NPAS2Q99743 824 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 YIPF2Q9BWQ6 316 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 ASF1AQ9Y294 204 aa12.97□□□□□ -0.33
EXOSC3-207ENST00000490516 LOC285095A0A1B0GVY8 99 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 SP1P08047 785 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 RALBP11234 206 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 ATP1B2P14415 290 aaPredicted RBP12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 FERP16591 822 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 KRT31Q15323 416 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 ZC3H12BQ5HYM0 836 aaKnown RBP12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 PRMT9Q6P2P2 845 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 FIGLAQ6QHK4 219 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 C2orf73Q8N5S3 287 aaPredicted RBP12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 MYRIPQ8NFW9 859 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 COX4I2Q96KJ9 171 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 TUBB6Q9BUF5 446 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 FAM96AQ9H5X1 160 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 MRPL47Q9HD33 250 aaKnown RBP12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 DMRT3Q9NQL9 472 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 ENAMQ9NRM1 1142 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 HACD3Q9P035 362 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
EXOSC3-207ENST00000490516 MPDZO75970 2070 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 ZNF407Q9C0G0 2248 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 IGHV3-20A0A0C4DH32 117 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 A6NNC1 897 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 STX7O15400 261 aaKnown RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 CTSVO60911 334 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 KIR2DL3P43628 341 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 WNT3AP56704 352 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 NKX6-1P78426 367 aaPredicted RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 RPA4Q13156 261 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 MAPKAPK3Q16644 382 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 BTBD16Q32M84 506 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 FRMPD2BQ6IN97 320 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 TMEM205Q6UW68 189 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 TAX1BP1Q86VP1 789 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 CPNE8Q86YQ8 564 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 TBC1D21Q8IYX1 336 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 NIPA2Q8N8Q9 360 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 LINC01555Q8NAE3 123 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms