RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HIBCHQ6NVY1 386 aaPredicted RBP18.96■□□□□ 0.63
SMC4-222ENST00000490207 IGDCC3Q8IVU1 814 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 SPNS2Q8IVW8 549 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 APLFQ8IW19 511 aaPredicted RBP18.96■□□□□ 0.63
SMC4-222ENST00000490207 CPNE9Q8IYJ1 553 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 OR2A1Q8NGT9 310 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 DLG3Q92796 817 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 ZUFSPQ96AP4 578 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 CERS2Q96G23 380 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 CFAP36Q96G28 342 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 SNF8Q96H20 258 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 PWWP2AQ96N64 755 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 PKP4Q99569 1192 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 NDNQ99608 321 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 SELENOSQ9BQE4 189 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 RNF14Q9UBS8 474 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 GPN3Q9UHW5 284 aaPredicted RBP18.96■□□□□ 0.63
SMC4-222ENST00000490207 TRMT6Q9UJA5 497 aaKnown RBP18.96■□□□□ 0.63
SMC4-222ENST00000490207 CHMP2BQ9UQN3 213 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 KLK4Q9Y5K2 254 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 PCM1Q15154 2024 aa18.96■□□□□ 0.63
SMC4-222ENST00000490207 ARGFXA6NJG6 315 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 ZNF839A8K0R7 811 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 SUV39H1O43463 412 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 ATXN8OSP0DMR3 200 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 CMPK1P30085 196 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 ELK3P41970 407 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 DCDP81605 110 aaKnown RBP18.95■□□□□ 0.62
SMC4-222ENST00000490207 TSTA3Q13630 321 aaPredicted RBP18.95■□□□□ 0.62
SMC4-222ENST00000490207 ARHGAP19Q14CB8 494 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 NAA25Q14CX7 972 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 HIF1AQ16665 826 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 TCTE1Q5JU00 501 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 MLIPQ5VWP3 458 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 PIWIL4Q7Z3Z4 852 aaKnown RBP18.95■□□□□ 0.62
SMC4-222ENST00000490207 CNTN4Q8IWV2 1026 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 TTC29Q8NA56 475 aaPredicted RBP18.95■□□□□ 0.62
SMC4-222ENST00000490207 FBXO15Q8NCQ5 510 aaPredicted RBP18.95■□□□□ 0.62
SMC4-222ENST00000490207 SMPDL3AQ92484 453 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 ACAT2Q9BWD1 397 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 TRIM55Q9BYV6 548 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 TRIM31Q9BZY9 425 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 NDOR1Q9UHB4 597 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 TP53TG5Q9Y2B4 290 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMC4-222ENST00000490207 CCDC88CQ9P219 2028 aa18.95■□□□□ 0.62
SMC4-222ENST00000490207 SEC16AO15027 2179 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 EIF3FO00303 357 aaPredicted RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 DNAJB5O75953 348 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 SEC31AO94979 1220 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 SYF2O95926 243 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 MCM3P25205 808 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 RPA3P35244 121 aaPredicted RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 HSD17B2P37059 387 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 GCGRP47871 477 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 CARSP49589 748 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 PNLIPRP1P54315 467 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 ARSFP54793 590 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 ARL4CP56559 192 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 CHAF1BQ13112 559 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 SLC9A5Q14940 896 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 UGT3A1Q6NUS8 523 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 SUSD1Q6UWL2 747 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 KIAA0408Q6ZU52 694 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 TTLL10Q6ZVT0 673 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 RNF44Q7L0R7 432 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 RAB43Q86YS6 212 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 LRRC39Q96DD0 335 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 KRT12Q99456 494 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 WDR83Q9BRX9 315 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 SLC6A20Q9NP91 592 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 MRPS30Q9NP92 439 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 PPANQ9NQ55 473 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 ACSS2Q9NR19 701 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 IFT80Q9P2H3 777 aaPredicted RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 SLC17A6Q9P2U8 582 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 ZC3H7BQ9UGR2 993 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 TLK1Q9UKI8 766 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 SPTA1P02549 2419 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 NUP210LQ5VU65 1888 aa18.94■□□□□ 0.62
SMC4-222ENST00000490207 HELZ2Q9BYK8 2649 aaKnown RBP18.94■□□□□ 0.62
SMC4-222ENST00000490207 PCSK5Q92824 1860 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 A0A1B0GX78 115 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 EFCAB8A8MWE9 144 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 PYCARD-AS1I3L0S3 204 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 NRP2O60462 931 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 CTSVO60911 334 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 NR1D1P20393 614 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 GRM7Q14831 915 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 NKAIN1Q4KMZ8 207 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 YOD1Q5VVQ6 348 aaPredicted RBP18.93■□□□□ 0.62
SMC4-222ENST00000490207 LRRC8EQ6NSJ5 796 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 UBE2R2Q712K3 238 aaPredicted RBP18.93■□□□□ 0.62
SMC4-222ENST00000490207 GALNT7Q86SF2 657 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 PPFIBP2Q8ND30 876 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 ASB11Q8WXH4 323 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 ZNF285Q96NJ3 590 aa18.93■□□□□ 0.62
SMC4-222ENST00000490207 DPH7Q9BTV6 452 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms