RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 PCDHGA7Q9Y5G6 932 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 CDRT15L2A8MXV6 281 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 CCNDBP1O95273 360 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 CAPNS1P04632 268 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 FGF3P11487 239 aaPredicted RBP16.81■□□□□ 0.28
ERCC3-207ENST00000490062 ST6GAL1P15907 406 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 RAB15P59190 212 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 IRF9Q00978 393 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 SNAP47Q5SQN1 464 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 BEND6Q5SZJ8 279 aaPredicted RBP16.81■□□□□ 0.28
ERCC3-207ENST00000490062 KLC3Q6P597 504 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 GPSM1Q86YR5 675 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 MYRIPQ8NFW9 859 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 EPS8L3Q8TE67 593 aaKnown RBP16.81■□□□□ 0.28
ERCC3-207ENST00000490062 RHBDF1Q96CC6 855 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 TCTN2Q96GX1 697 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 FCRL4Q96PJ5 515 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 DDA1Q9BW61 102 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 ASCL3Q9NQ33 180 aa16.81■□□□□ 0.28
ERCC3-207ENST00000490062 CCDC177Q9NQR7 707 aaPredicted RBP16.81■□□□□ 0.28
ERCC3-207ENST00000490062 INTS7Q9NVH2 962 aaKnown RBP16.81■□□□□ 0.28
ERCC3-207ENST00000490062 SLC9B1P1A6NJY1 282 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 A8MU76 341 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 NVLO15381 856 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 KLK8O60259 260 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 IPO13O94829 963 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 GSTA1P08263 222 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 RBP1P09455 135 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 MTHFD2P13995 350 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 HRH2P25021 359 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 GMPRP36959 345 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 GRIA3P42263 894 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 SLC6A12P48065 614 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 GABRA4P48169 554 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 KCNC1P48547 511 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 ERVPABLB-1P60509 514 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 TBPL1P62380 186 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 GABREP78334 506 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 ACY1Q03154 408 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 IL11RAQ14626 422 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 TECRLQ5HYJ1 363 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 C3orf38Q5JPI3 329 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 SULT1C3Q6IMI6 304 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 MBOAT1Q6ZNC8 495 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 FRA10AC1Q70Z53 315 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 C19orf47Q8N9M1 422 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 OR8K5Q8NH50 307 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 TEFMQ96QE5 360 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 TAAR9Q96RI9 348 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 MIPEPQ99797 713 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 ZPBPQ9BS86 351 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 VPS11Q9H270 941 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 PDE7BQ9NP56 450 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 OCIAD1Q9NX40 245 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 NUDT4Q9NZJ9 180 aa16.8■□□□□ 0.28
ERCC3-207ENST00000490062 PTBP2Q9UKA9 531 aaKnown RBP16.8■□□□□ 0.28
ERCC3-207ENST00000490062 HEATR5BQ9P2D3 2071 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 CEP295Q9C0D2 2601 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 OR2A25A4D2G3 310 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 JMJD7P0C870 316 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 FGF5P12034 268 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 CCL4P13236 92 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 CMPK1P30085 196 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 RPA3P35244 121 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-207ENST00000490062 NAE1Q13564 534 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
ERCC3-207ENST00000490062 ZIC1Q15915 447 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 TMTC4Q5T4D3 741 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 PRAMEF13Q5VWM6 474 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 KIAA1614Q5VZ46 1190 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 ICE2Q659A1 982 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 ZNF425Q6IV72 752 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 METTL2BQ6P1Q9 378 aaKnown RBP16.79■□□□□ 0.28
ERCC3-207ENST00000490062 SUSD1Q6UWL2 747 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 CYP4X1Q8N118 509 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 C2orf73Q8N5S3 287 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-207ENST00000490062 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 UBTD2Q8WUN7 234 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 HAUS8Q9BT25 410 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 ALG9Q9H6U8 611 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 UTP6Q9NYH9 597 aaKnown RBP16.79■□□□□ 0.28
ERCC3-207ENST00000490062 RNF112Q9ULX5 631 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 PLAAQ9Y263 795 aa16.79■□□□□ 0.28
ERCC3-207ENST00000490062 EFCAB7A8K855 629 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 GUCA1CO95843 209 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 PVRP15151 417 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 NPPBP16860 134 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 MAGP20916 626 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 CD82P27701 267 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 PSMB5P28074 263 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 ETV5P41161 510 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 SLCO1A2P46721 670 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 SEPHS1P49903 392 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 IFFO1Q0D2I5 559 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms