RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KRT35Q92764 455 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 SLC22A18Q96BI1 424 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 SPATA13Q96N96 652 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 ZNF304Q9HCX3 659 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 ZNF282Q9UDV7 671 aaPredicted RBP13.33□□□□□ -0.28
VARS-227ENST00000489979 INTUQ9ULD6 942 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 NCOA6Q14686 2063 aaPredicted RBP13.33□□□□□ -0.28
VARS-227ENST00000489979 MTORP42345 2549 aa13.33□□□□□ -0.28
VARS-227ENST00000489979 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 HYKKA2RU49 373 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 GOLGA6L19H0YKK7 550 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 RASAL1O95294 804 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 SERPINA7P05543 415 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 UQCRHP07919 91 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 CELA2AP08217 269 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 RBP3P10745 1247 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 FDXRP22570 491 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 EIF3EP60228 445 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 GRB7Q14451 532 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 DARS2Q6PI48 645 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 XKRXQ6PP77 449 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 LAPTM4BQ86VI4 370 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 VRK3Q8IV63 474 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 PPP1R2P1Q96PQ5 205 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 ALS2CR12Q96Q35 445 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
VARS-227ENST00000489979 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 STOX2Q9P2F5 926 aaPredicted RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 MRPS2Q9Y399 296 aaKnown RBP13.32□□□□□ -0.28
VARS-227ENST00000489979 C19orf84I3L1E1 186 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 OR1I1O60431 355 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 SRPX2O60687 465 aaPredicted RBP13.31□□□□□ -0.28
VARS-227ENST00000489979 CTSVO60911 334 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 WFS1O76024 890 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 BMP10O95393 424 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 WDPCPO95876 746 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 CTNNA2P26232 953 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 FOXN2P32314 431 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 KRTAP10-9P60411 292 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 ADORA2A-AS1P86434 159 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 EEF1A2Q05639 463 aaKnown RBP13.31□□□□□ -0.28
VARS-227ENST00000489979 RBPJQ06330 500 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 HSPA14Q0VDF9 509 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.282e-6■□□□□ 8.6
VARS-227ENST00000489979 KCTD11Q693B1 232 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 FRMPD2BQ6IN97 320 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 PRMT9Q6P2P2 845 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 CNSTQ6PJW8 725 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 DCUN1D3Q8IWE4 304 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 KLHDC8BQ8IXV7 354 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 OR2L8Q8NGY9 312 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 DNAJB8Q8NHS0 232 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 ZUFSPQ96AP4 578 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 ZC3H7BQ9UGR2 993 aaKnown RBP13.31□□□□□ -0.28
VARS-227ENST00000489979 SLC39A10Q9ULF5 831 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.31□□□□□ -0.28
VARS-227ENST00000489979 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
VARS-227ENST00000489979 LOC105369274A0A096LPK9 316 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 LOC102723532A0A0G2JNH3 316 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 SYCE3A1L190 88 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 CCDC162PA2VCL2 907 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 TARM1B6A8C7 271 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 RASGRF2O14827 1237 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
VARS-227ENST00000489979 NRP2O60462 931 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 WISP2O76076 250 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 RPN2P04844 631 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 TPM3P06753 285 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 FBLP22087 321 aaKnown RBP13.3□□□□□ -0.28
VARS-227ENST00000489979 CXCR2P25025 360 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 SSTR2P30874 369 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 CCR7P32248 378 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 EMP2P54851 167 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 HADHBP55084 474 aaKnown RBP13.3□□□□□ -0.28
VARS-227ENST00000489979 CASP6P55212 293 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 TRIM14Q14142 442 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 TESK1Q15569 626 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 FAAH2Q6GMR7 532 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
VARS-227ENST00000489979 OR4N4Q8N0Y3 316 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 LKAAEAR1Q8TD35 194 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 NF1P21359 2839 aa13.3□□□□□ -0.28
VARS-227ENST00000489979 IGLV3-12A0A075B6K2 115 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 IGHV1-45A0A0A0MS14 117 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 MROH6A6NGR9 719 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 IDSB3KWA1 339 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 FFAR3O14843 346 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 GPR42O15529 346 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 PJA2O43164 708 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 SLC19A2O60779 497 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 GPC4O75487 556 aa13.29□□□□□ -0.28
VARS-227ENST00000489979 FKBP9O95302 570 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms