RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 ERVK-10P10266 1014 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 ACPPP15309 386 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 ADRA1DP25100 572 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 MCM3P25205 808 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 STIP1P31948 543 aaKnown RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 FDFT1P37268 417 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 OR1D4P47884 311 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 VSX2P58304 361 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 KLF1Q13351 362 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 MFAP5Q13361 173 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 NAA25Q14CX7 972 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 C1QL3Q5VWW1 255 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 PTRHD1Q6GMV3 140 aaKnown RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 ISLR2Q6UXK2 745 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 COX15Q7KZN9 410 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 KIAA1328Q86T90 577 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 TXLNBQ8N3L3 684 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 METTL27Q8N6F8 245 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 LRRC57Q8N9N7 239 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 PPHLN1Q8NEY8 458 aaKnown RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 OR11G2Q8NGC1 345 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 PEX13Q92968 403 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 RAD51AP1Q96B01 352 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 MIEF2Q96C03 454 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 PANX3Q96QZ0 392 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 MENTQ9BUN1 341 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 LACRTQ9GZZ8 138 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 ZNF304Q9HCX3 659 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 CATSPERZQ9NTU4 200 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 ZNF282Q9UDV7 671 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 SLC2A6Q9UGQ3 507 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 PACSIN2Q9UNF0 486 aaPredicted RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 MAU2Q9Y6X3 613 aa8.96□□□□□ -0.98
SNX17-207ENST00000489402 MDC1Q14676 2089 aaKnown RBP8.96□□□□□ -0.98
SNX17-207ENST00000489402 CROCCQ5TZA2 2017 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 DYTNA2CJ06 578 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 HYKKA2RU49 373 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 FITM1A5D6W6 292 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 IQCF5A8MTL0 148 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 E2F3O00716 465 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 PRMT5O14744 637 aaPredicted RBP8.95□□□□□ -0.98
SNX17-207ENST00000489402 HNRNPRO43390 633 aaKnown RBP8.95□□□□□ -0.98
SNX17-207ENST00000489402 NRP2O60462 931 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 USP1O94782 785 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 SUN1O94901 812 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 SLCO2B1O94956 709 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MED26O95402 600 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 IFNB1P01574 187 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 UQCRHP07919 91 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 AOAHP28039 575 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 TNFRSF8P28908 595 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 GRIA1P42261 906 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 TTPAP49638 278 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ARG2P78540 354 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ACVR1Q04771 509 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 KLC1Q07866 573 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 GRB7Q14451 532 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 SEMA3AQ14563 771 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ZRSR2Q15696 482 aaKnown RBP8.95□□□□□ -0.98
SNX17-207ENST00000489402 MUM1Q2TAK8 710 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 WASHC2DQ5SRD0 308 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 PRMT9Q6P2P2 845 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 LINC00696Q6ZRV3 163 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ZNF534Q76KX8 674 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 KRT222Q8N1A0 295 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 BCORP1Q8N888 145 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 LKAAEAR1Q8TD35 194 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MAGEC3Q8TD91 643 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MOCOSQ96EN8 888 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MAGEB10Q96LZ2 347 aaPredicted RBP8.95□□□□□ -0.98
SNX17-207ENST00000489402 ZNF778Q96MU6 729 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 FOPNLQ96NB1 174 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ZNF285Q96NJ3 590 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 LMF1Q96S06 567 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 MIPEPQ99797 713 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 ENAMQ9NRM1 1142 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 OLAHQ9NV23 265 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 GNPTGQ9UJJ9 305 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 TTC7AQ9ULT0 858 aaPredicted RBP8.95□□□□□ -0.98
SNX17-207ENST00000489402 ENTPD4Q9Y227 616 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 TCAF1Q9Y4C2 921 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 NOTCH2Q04721 2471 aa8.95□□□□□ -0.98
SNX17-207ENST00000489402 DCHS2Q6V1P9 2916 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 NSG1A0A0A6YYJ2 146 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 A0A0J9YVX5 310 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 ARHGAP10A1A4S6 786 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 VSTM2BA6NLU5 285 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 PRPF4O43172 522 aaKnown RBP eCLIP8.94□□□□□ -0.98
SNX17-207ENST00000489402 ZG16O60844 167 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 CTSVO60911 334 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 NDUFS3O75489 264 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 JRKO75564 520 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 C1orf105O95561 183 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 FTCDO95954 541 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 EIF2S1P05198 315 aaKnown RBP8.94□□□□□ -0.98
SNX17-207ENST00000489402 ZGLP1P0C6A0 271 aa8.94□□□□□ -0.98
SNX17-207ENST00000489402 FBLP22087 321 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms