RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MYO18BQ8IUG5 2567 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 C9J4A7 227 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 TTC4O95801 387 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 CATP04040 527 aaKnown RBP23.98■■□□□ 1.43
HMGN1-217ENST00000489072 ATXN8OSP0DMR3 200 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 NR1D1P20393 614 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 GABRB3P28472 473 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 TIAL1Q01085 375 aaKnown RBP eCLIP23.98■■□□□ 1.43
HMGN1-217ENST00000489072 MORF4L2Q15014 288 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 SPANXN3Q5MJ09 141 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 HP1BP3Q5SSJ5 553 aaPredicted RBP23.98■■□□□ 1.43
HMGN1-217ENST00000489072 HIBCHQ6NVY1 386 aaPredicted RBP23.98■■□□□ 1.43
HMGN1-217ENST00000489072 CYHR1Q6ZMK1 362 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 PROKR1Q8TCW9 393 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 INPP5DQ92835 1189 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 ZUFSPQ96AP4 578 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 RUNDC3BQ96NL0 473 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 FAM114A2Q9NRY5 505 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 TP53TG5Q9Y2B4 290 aa23.98■■□□□ 1.43
HMGN1-217ENST00000489072 TNRC6AQ8NDV7 1962 aaKnown RBP23.98■■□□□ 1.43
HMGN1-217ENST00000489072 NBASA2RRP1 2371 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 TARM1B6A8C7 271 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 MPC1LP0DKB6 136 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 MCM3P25205 808 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 DCDP81605 110 aaKnown RBP23.97■■□□□ 1.43
HMGN1-217ENST00000489072 CHAF1BQ13112 559 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 LACTB2Q53H82 288 aaPredicted RBP23.97■■□□□ 1.43
HMGN1-217ENST00000489072 ZC3H12BQ5HYM0 836 aaKnown RBP23.97■■□□□ 1.43
HMGN1-217ENST00000489072 SUSD1Q6UWL2 747 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 CPNE9Q8IYJ1 553 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 ASB11Q8WXH4 323 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 ZNF285Q96NJ3 590 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 NDNQ99608 321 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 NAT9Q9BTE0 207 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 NDC1Q9BTX1 674 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 ACAT2Q9BWD1 397 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 TXLNGQ9NUQ3 528 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 SLC17A6Q9P2U8 582 aa23.97■■□□□ 1.43
HMGN1-217ENST00000489072 MDC1Q14676 2089 aaKnown RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ARGFXA6NJG6 315 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 MKRN2OSH3BPM6 223 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 CCDC188H7C350 402 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 TP73O15350 636 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 CNOT3O75175 753 aaKnown RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 KLF7O75840 302 aaPredicted RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ENO3P13929 434 aaPredicted RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ITGAXP20702 1163 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ELK3P41970 407 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 PAFAH1B1P43034 410 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ITGA8P53708 1063 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 SLC9A5Q14940 896 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 MLIPQ5VWP3 458 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 ATG14Q6ZNE5 492 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 PIWIL4Q7Z3Z4 852 aaKnown RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 CNTN4Q8IWV2 1026 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 PDIK1LQ8N165 341 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 FBXO15Q8NCQ5 510 aaPredicted RBP23.96■■□□□ 1.43
HMGN1-217ENST00000489072 SMPDL3AQ92484 453 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 DHRS4Q9BTZ2 278 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 TRIM4Q9C037 500 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 SLC6A20Q9NP91 592 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 SLC22A11Q9NSA0 550 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 CHMP2BQ9UQN3 213 aa23.96■■□□□ 1.43
HMGN1-217ENST00000489072 GFYI3L273 518 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 VPS26AO75436 327 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 SEC31AO94979 1220 aaKnown RBP23.95■■□□□ 1.42
HMGN1-217ENST00000489072 FOXL2P58012 376 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 ARHGAP19Q14CB8 494 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 NKAIN1Q4KMZ8 207 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 RBM20Q5T481 1227 aaKnown RBP23.95■■□□□ 1.42
HMGN1-217ENST00000489072 FRMPD2BQ6IN97 320 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 TMEM151BQ8IW70 566 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 CERS2Q96G23 380 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 CFAP36Q96G28 342 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 SELENOSQ9BQE4 189 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 TRIM31Q9BZY9 425 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 ENAMQ9NRM1 1142 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 TEX264Q9Y6I9 313 aa23.95■■□□□ 1.42
HMGN1-217ENST00000489072 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.95■■□□□ 1.42
HMGN1-217ENST00000489072 SLC16A8O95907 504 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 AHSGP02765 367 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 CARSP49589 748 aaKnown RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 PNLIPRP1P54315 467 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 TCTN3Q6NUS6 607 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 TRMT10BQ6PF06 316 aaKnown RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 TTLL10Q6ZVT0 673 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 C17orf53Q8N3J3 647 aaPredicted RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 PPFIBP2Q8ND30 876 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 ZNF480Q8WV37 535 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 DLG3Q92796 817 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 SNF8Q96H20 258 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 KRT12Q99456 494 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 C17orf62Q9BQA9 187 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 DPH7Q9BTV6 452 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 ING2Q9H160 280 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 IFT80Q9P2H3 777 aaPredicted RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 RNF14Q9UBS8 474 aa23.94■■□□□ 1.42
HMGN1-217ENST00000489072 ZC3H7BQ9UGR2 993 aaKnown RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 GPN3Q9UHW5 284 aaPredicted RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 PADI2Q9Y2J8 665 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms