RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CUTCQ9NTM9 273 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 INTS10Q9NVR2 710 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 TRMT1Q9NXH9 659 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 GPR83Q9NYM4 423 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 LUZP4Q9P127 313 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 STOX2Q9P2F5 926 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 G3BP2Q9UN86 482 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 VPS9D1Q9Y2B5 631 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
CCHCR1-215ENST00000488920 LOC105369274A0A096LPK9 316 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 A0A0J9YVX5 310 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 A0A1B0GX78 115 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 DSCR3O14972 297 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 KIF5CO60282 957 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 USP1O94782 785 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 FKBP9O95302 570 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 EIF2S1P05198 315 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 OR1D4P47884 311 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 CLCN7P51798 805 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 TSTA3Q13630 321 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 UBAP2LQ14157 1087 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 DCAF10Q5QP82 559 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 FRMPD2BQ6IN97 320 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 FBXO42Q6P3S6 717 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF549Q6P9A3 640 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 SUSD1Q6UWL2 747 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 SHISA6Q6ZSJ9 500 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 OVCH1Q7RTY7 1134 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 ATCAYQ86WG3 371 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 ACTRT1Q8TDG2 376 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 SIGLEC10Q96LC7 697 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 FER1L6-AS2Q96M78 137 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF285Q96NJ3 590 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 IP6K3Q96PC2 410 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 PKP4Q99569 1192 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 DPH7Q9BTV6 452 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 C20orf96Q9NUD7 363 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 P4HTMQ9NXG6 502 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 SPATA7Q9P0W8 599 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 ZC3H7BQ9UGR2 993 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 KLK4Q9Y5K2 254 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 MAU2Q9Y6X3 613 aa11.43□□□□□ -0.58
CCHCR1-215ENST00000488920 HYKKA2RU49 373 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 FITM1A5D6W6 292 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 MYO1CO00159 1063 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SRPX2O60687 465 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 DPM1O60762 260 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PHF2O75151 1096 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PSIP1O75475 530 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 MED26O95402 600 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CATP04040 527 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PIM1P11309 404 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CMPK1P30085 196 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 RPA3P35244 121 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC1A2P43004 574 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 MAGEA3P43357 314 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CD97P48960 835 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CUL1Q13616 776 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 LONRF1Q17RB8 773 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 FAM214AQ32MH5 1076 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 JMJD6Q6NYC1 403 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 COX15Q7KZN9 410 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PPIL6Q8IXY8 311 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 RBMXL3Q8N7X1 1067 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 TTC29Q8NA56 475 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CLEC1AQ8NC01 280 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 GIMAP7Q8NHV1 300 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CPT1CQ8TCG5 803 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 GRK7Q8WTQ7 553 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SMPDL3AQ92484 453 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SMAD5Q99717 465 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 GRPEL1Q9HAV7 217 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC6A20Q9NP91 592 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 FAM114A2Q9NRY5 505 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 FBXO5Q9UKT4 447 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SNX12Q9UMY4 172 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 MED16Q9Y2X0 877 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PCDHGB7Q9Y5F8 929 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 FAM169AQ9Y6X4 670 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 RELNP78509 3460 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
CCHCR1-215ENST00000488920 SEC16AO15027 2179 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 GOLGA6L10A0A0M3HER8 536 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 CYSRT1A8MQ03 144 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ZSCAN12O43309 604 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 HAUS5O94927 633 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 SYF2O95926 243 aaKnown RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ONECUT2O95948 504 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 IGHEP01854 428 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ALBP02768 609 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ERGP11308 486 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 FNTAP49354 379 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms