RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DAB2P98082 770 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 KLF10Q13118 480 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 ACAP2Q15057 778 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 C6orf163Q5TEZ5 329 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 KLC3Q6P597 504 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 OR52B2Q96RD2 323 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 NCKIPSDQ9NZQ3 722 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 RNF215Q9Y6U7 377 aa18.8■□□□□ 0.6
CCM2-216ENST00000488727 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.8■□□□□ 0.6
CCM2-216ENST00000488727 EME2A4GXA9 379 aaPredicted RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 ZBTB14O43829 449 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 CKMT2P17540 419 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 TFEBP19484 476 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 CSRP1P21291 193 aaKnown RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 ADSLP30566 484 aaPredicted RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 RPIAP49247 311 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 HHEXQ03014 270 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 BTKQ06187 659 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 PDAP1Q13442 181 aaKnown RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 CSHL1Q14406 222 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 TTLL9Q3SXZ7 439 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 UGT3A1Q6NUS8 523 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 TMEM207Q6UWW9 146 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 ACAD11Q709F0 780 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 CPSF7Q8N684 471 aaKnown RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 STMN2Q93045 179 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 RSRC1Q96IZ7 334 aaKnown RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 CDC6Q99741 560 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 THTPAQ9BU02 230 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 ZNF385DQ9H6B1 395 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 POPDC3Q9HBV1 291 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 GPAMQ9HCL2 828 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 STX18Q9P2W9 335 aaKnown RBP18.79■□□□□ 0.6
CCM2-216ENST00000488727 SLC7A8Q9UHI5 535 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 ZDHHC2Q9UIJ5 367 aa18.79■□□□□ 0.6
CCM2-216ENST00000488727 DCHS1Q96JQ0 3298 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 CPED1A4D0V7 1026 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 E9PBE3 544 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 H0Y3Z8 333 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 IFRD1O00458 451 aaPredicted RBP18.78■□□□□ 0.6
CCM2-216ENST00000488727 TNFSF14O43557 240 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 NUDT21O43809 227 aaKnown RBP18.78■□□□□ 0.6
CCM2-216ENST00000488727 KLHL41O60662 606 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 KRT36O76013 467 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 GLB1P16278 677 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 ACTR3P61158 418 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 ABRQ12979 859 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 RCN1Q15293 331 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 TRIP6Q15654 476 aaKnown RBP18.78■□□□□ 0.6
CCM2-216ENST00000488727 PERM1Q5SV97 790 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 SLC9B2Q86UD5 537 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 ZNF761Q86XN6 746 aaPredicted RBP18.78■□□□□ 0.6
CCM2-216ENST00000488727 PHC3Q8NDX5 983 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 EEF1AKMT1Q8WVE0 214 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 TFGQ92734 400 aaPredicted RBP18.78■□□□□ 0.6
CCM2-216ENST00000488727 CXorf40BQ96DE9 158 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 POT1Q9NUX5 634 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 LRIT1Q9P2V4 623 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 LRRC42Q9Y546 428 aa18.78■□□□□ 0.6
CCM2-216ENST00000488727 A0A088AWK7 358 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 GIPC1O14908 333 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 CCNT2O60583 730 aaKnown RBP18.77■□□□□ 0.6
CCM2-216ENST00000488727 TSPAN12O95859 305 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 VIPP01282 170 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 COX4I1P13073 169 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 ZNF37AP17032 561 aaPredicted RBP18.77■□□□□ 0.6
CCM2-216ENST00000488727 ACP1P24666 158 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 CCR10P46092 362 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 PTDSS1P48651 473 aaKnown RBP18.77■□□□□ 0.6
CCM2-216ENST00000488727 GALNT1Q10472 559 aaPredicted RBP18.77■□□□□ 0.6
CCM2-216ENST00000488727 ZNF438Q7Z4V0 828 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 SLC22A9Q8IVM8 553 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 SPATA6LQ8N4H0 392 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 POU5F2Q8N7G0 328 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 ACTRT2Q8TDY3 377 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 CCDC74AQ96AQ1 378 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 RTKNQ9BST9 563 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 SLC32A1Q9H598 525 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 TOR4AQ9NXH8 423 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 ASF1AQ9Y294 204 aa18.77■□□□□ 0.6
CCM2-216ENST00000488727 CASC3O15234 703 aaKnown RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 MATN4O95460 622 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 CCDC166P0CW27 439 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 ACADVLP49748 655 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 DUSP3P51452 185 aaPredicted RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 SLC34A1Q06495 639 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 HERC3Q15034 1050 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 LSM12Q3MHD2 195 aaKnown RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 PGM2L1Q6PCE3 622 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 CYHR1Q6ZMK1 362 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 RIPOR1Q6ZS17 1223 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 EFL1Q7Z2Z2 1120 aaKnown RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 GLRX5Q86SX6 157 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 TRIM48Q8IWZ4 208 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 KIRREL3Q8IZU9 778 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 OR5AR1Q8NGP9 310 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 SKA2Q8WVK7 121 aaPredicted RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 MAELQ96JY0 434 aaKnown RBP18.77■□□□□ 0.59
CCM2-216ENST00000488727 FAR2Q96K12 515 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms