RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CHMP2BQ9UQN3 213 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 TP53TG5Q9Y2B4 290 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 PADI2Q9Y2J8 665 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 COMMD10Q9Y6G5 202 aa17.04■□□□□ 0.32
ITGB1-215ENST00000488494 ARGFXA6NJG6 315 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 SUV39H1O43463 412 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 CTSVO60911 334 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 VPS26AO75436 327 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 PAFAH1B1P43034 410 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 TSTA3Q13630 321 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 ZC3H12BQ5HYM0 836 aaKnown RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 ATG14Q6ZNE5 492 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 PIWIL4Q7Z3Z4 852 aaKnown RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 PDIK1LQ8N165 341 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 OR2A1Q8NGT9 310 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 DLG3Q92796 817 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 SNF8Q96H20 258 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 PKP4Q99569 1192 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 C17orf62Q9BQA9 187 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 SELENOSQ9BQE4 189 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 WDR83Q9BRX9 315 aaKnown RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 AARSD1Q9BTE6 412 aaKnown RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 DHRS4Q9BTZ2 278 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 ACAT2Q9BWD1 397 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 TRIM31Q9BZY9 425 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 PLAC1Q9HBJ0 212 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 KLHL42Q9P2K6 505 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 GPN3Q9UHW5 284 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 TLK1Q9UKI8 766 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 DHRS7Q9Y394 339 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 UBR5O95071 2799 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-215ENST00000488494 FER1L5A0AVI2 2057 aa17.03■□□□□ 0.32
ITGB1-215ENST00000488494 CCDC188H7C350 402 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SEC31AO94979 1220 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SLC16A8O95907 504 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SYF2O95926 243 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 ENO3P13929 434 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 MCM3P25205 808 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 RPA3P35244 121 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 ELK3P41970 407 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 GCGRP47871 477 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 ITGA8P53708 1063 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 DCDP81605 110 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 HIF1AQ16665 826 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 MLIPQ5VWP3 458 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 HIBCHQ6NVY1 386 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 C17orf53Q8N3J3 647 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 CERS2Q96G23 380 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 SLC6A20Q9NP91 592 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 PPANQ9NQ55 473 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 IFT80Q9P2H3 777 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 NDOR1Q9UHB4 597 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 TRMT6Q9UJA5 497 aaKnown RBP17.02■□□□□ 0.32
ITGB1-215ENST00000488494 KLK4Q9Y5K2 254 aa17.02■□□□□ 0.32
ITGB1-215ENST00000488494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.02■□□□□ 0.328e-10■□□□□ 8
ITGB1-215ENST00000488494 A0A1B0GX78 115 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 TARM1B6A8C7 271 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 K7EM74 188 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 MPC1LP0DKB6 136 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 CMPK1P30085 196 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 OTX2P32243 289 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 PNLIPRP1P54315 467 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 ARL4CP56559 192 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
ITGB1-215ENST00000488494 YBX1P67809 324 aaKnown RBP17.01■□□□□ 0.31
ITGB1-215ENST00000488494 ARHGAP19Q14CB8 494 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 NKAIN1Q4KMZ8 207 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
ITGB1-215ENST00000488494 TTLL10Q6ZVT0 673 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 RNF44Q7L0R7 432 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 CNTN4Q8IWV2 1026 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 PPFIBP2Q8ND30 876 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 ASB11Q8WXH4 323 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 KRT12Q99456 494 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 DPH7Q9BTV6 452 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 ACSS2Q9NR19 701 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 TAC3Q9UHF0 121 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 PTRH2Q9Y3E5 179 aaKnown RBP17.01■□□□□ 0.31
ITGB1-215ENST00000488494 PCSK5Q92824 1860 aa17.01■□□□□ 0.31
ITGB1-215ENST00000488494 ZNF839A8K0R7 811 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 SMAPO00193 183 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 KLF7O75840 302 aaPredicted RBP17■□□□□ 0.31
ITGB1-215ENST00000488494 ITGAXP20702 1163 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ALAS2P22557 587 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 GABRB3P28472 473 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 HSD17B2P37059 387 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 FOLR3P41439 243 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 CARSP49589 748 aaKnown RBP17■□□□□ 0.31
ITGB1-215ENST00000488494 CDKN2DP55273 166 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 FOXL2P58012 376 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ATP1A4Q13733 1029 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 GRM7Q14831 915 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 NAA25Q14CX7 972 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 TCTE1Q5JU00 501 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms