RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 COL16A1Q07092 1604 aaPredicted RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 PI4KAP2A4QPH2 592 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 G3V2L1 256 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 J3KRW8 73 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 TOMM70O94826 608 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 POP4O95707 220 aaKnown RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 OXTRP30559 389 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 CSTF2P33240 577 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMC4-219ENST00000487747 SOX3P41225 446 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 ZFP36L2P47974 494 aaKnown RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 UGT3A2Q3SY77 523 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 EIPR1Q53HC9 387 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 SLC35D3Q5M8T2 416 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 RNASEH2BQ5TBB1 312 aaKnown RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 JAKMIP3Q5VZ66 844 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 LEKR1Q6ZMV7 388 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 NUDT13Q86X67 352 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 SSMEM1Q8WWF3 244 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 SAT2Q96F10 170 aaPredicted RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 PAFAH2Q99487 392 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 MAP3K3Q99759 626 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 OVOL2Q9BRP0 275 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 GKN1Q9NS71 199 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 ARHGEF38Q9NXL2 777 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 PRO0461Q9UI25 63 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 ZNF107Q9UII5 783 aaPredicted RBP3.24□□□□□ -1.89
SMC4-219ENST00000487747 TMED3Q9Y3Q3 217 aa3.24□□□□□ -1.89
SMC4-219ENST00000487747 A0A087X0M5 115 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 A0A1B0GX30 115 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 OR2A25A4D2G3 310 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 PGPEP1LA6NFU8 196 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 PTGES3LE9PB15 166 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 PHF1O43189 567 aaPredicted RBP3.23□□□□□ -1.89
SMC4-219ENST00000487747 SNAP91O60641 907 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 SLC9A3P48764 834 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 ARSEP51690 589 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 PNLIPRP2P54317 469 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 CDH18Q13634 790 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 FAM189A2Q15884 450 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 TIPARPQ7Z3E1 657 aaKnown RBP3.23□□□□□ -1.89
SMC4-219ENST00000487747 ARHGAP22Q7Z5H3 698 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 KCNMB4Q86W47 210 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 ZFAND4Q86XD8 727 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 WIPI2Q9Y4P8 454 aa3.23□□□□□ -1.89
SMC4-219ENST00000487747 RALGAPA1Q6GYQ0 2036 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 MEIS2O14770 477 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 NPHP1O15259 732 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 TPD52L2O43399 206 aaKnown RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 GPRIN2O60269 458 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 PTP4A3O75365 173 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 EIF3JO75822 258 aaKnown RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 BCL10O95999 233 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 RPL35AP18077 110 aaKnown RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 CAPGP40121 348 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 SLC15A1P46059 708 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 DHRS7BQ6IAN0 325 aaPredicted RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 TMEM173Q86WV6 379 aaPredicted RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 MMD2Q8IY49 270 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 SUMF1Q8NBK3 374 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 SLC37A3Q8NCC5 494 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 MORC4Q8TE76 937 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 C2orf48Q96LS8 159 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 FAM49AQ9H0Q0 323 aaPredicted RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 UNC45AQ9H3U1 944 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 TUBB1Q9H4B7 451 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 SMARCAD1Q9H4L7 1026 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 EIF2B3Q9NR50 452 aaKnown RBP3.22□□□□□ -1.89
SMC4-219ENST00000487747 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
SMC4-219ENST00000487747 NPIPB9F8W1W9 429 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 TFECO14948 347 aaPredicted RBP3.21□□□□□ -1.9
SMC4-219ENST00000487747 ADAMDEC1O15204 470 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 TSPAN1O60635 241 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 HAPLN1P10915 354 aaPredicted RBP3.21□□□□□ -1.9
SMC4-219ENST00000487747 TRIM21P19474 475 aaKnown RBP3.21□□□□□ -1.9
SMC4-219ENST00000487747 DNASE1P24855 282 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 TMEM132DQ14C87 1099 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 ALFQ53S48 1182 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 IGSF11Q5DX21 431 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 RAB41Q5JT25 222 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 FAM131BQ86XD5 332 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 ZNF595Q8IYB9 648 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 THAP8Q8NA92 274 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 C4orf45Q96LM5 186 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 ZNF597Q96LX8 424 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 LGMNQ99538 433 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 LPAR4Q99677 370 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 HOXD1Q9GZZ0 328 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 PARLQ9H300 379 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 TLE6Q9H808 572 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 R4GN57 208 aa3.21□□□□□ -1.9
SMC4-219ENST00000487747 COL4A4P53420 1690 aaPredicted RBP3.2□□□□□ -1.9
SMC4-219ENST00000487747 ZNF840PA6NDX5 716 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 CTDSP2O14595 271 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 TEX28O15482 410 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 GALR3O60755 368 aaPredicted RBP3.2□□□□□ -1.9
SMC4-219ENST00000487747 MBD4O95243 580 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 MPZP25189 248 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 CDH13P55290 713 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms