RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RSL1D1O76021 490 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 IDSP22304 550 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CCND1P24385 295 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 OXTRP30559 389 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CTBSQ01459 385 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 RCAN2Q14206 197 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CYP2A13Q16696 494 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 UAP1L1Q3KQV9 507 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SGO1Q5FBB7 561 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 REP15Q6BDI9 236 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 DUS1LQ6P1R4 473 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ABI3BPQ7Z7G0 1075 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ZFAND4Q86XD8 727 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SCUBE1Q8IWY4 988 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 DSELQ8IZU8 1212 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SIX5Q8N196 739 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 LMNTD1Q8N9Z9 388 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TSPEARQ8WU66 669 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SELENOMQ8WWX9 145 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CLPTM1LQ96KA5 538 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 IL17FQ96PD4 163 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NELL2Q99435 816 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NPAS2Q99743 824 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 THTPAQ9BU02 230 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 OSGEPL1Q9H4B0 414 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 EHD1Q9H4M9 534 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ACTL8Q9H568 366 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 DENND2DQ9H6A0 471 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CCDC177Q9NQR7 707 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 GPR27Q9NS67 375 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NDE1Q9NXR1 346 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NOP53Q9NZM5 478 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SPATA7Q9P0W8 599 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SLC7A8Q9UHI5 535 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 FBXL21Q9UKT6 434 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 PLAGL1Q9UM63 463 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 GPSM3Q9Y4H4 160 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 IGHV1OR15-9A0A0B4J2B8 117 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PRAMEF26H0Y7S4 382 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ATP6V1G2O95670 118 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CAPN3P20807 821 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 HTR1BP28222 390 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CD6P30203 668 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 HSD17B2P37059 387 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NEK2P51955 445 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NME5P56597 212 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 RPL38P63173 70 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 TBL3Q12788 808 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CSTF3Q12996 717 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 MAD2L1Q13257 205 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 LRP8Q14114 963 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CLCA4Q14CN2 919 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 KIAA0040Q15053 153 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 WASHC2DQ5SRD0 308 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 LCTLQ6UWM7 567 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 C16orf89Q6UX73 402 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PGAM4Q8N0Y7 254 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PROKR1Q8TCW9 393 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SETD7Q8WTS6 366 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 BIRC7Q96CA5 298 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SLC45A3Q96JT2 553 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 C12orf66Q96MD2 445 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ORAI3Q9BRQ5 295 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 RASSF4Q9H2L5 321 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 LRTM1Q9HBL6 345 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 C1orf109Q9NX04 203 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 MOSPD1Q9UJG1 213 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 DMTF1Q9Y222 760 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 POLR3HQ9Y535 204 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NR5A2O00482 541 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PI15O43692 258 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NRP2O60462 931 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ZNF217O75362 1048 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SLC22A3O75751 556 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 G6PDP11413 515 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SLC2A4P14672 509 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 JAK1P23458 1154 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 IL12AP29459 219 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NUDT1P36639 197 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 UFM1P61960 85 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PRKG2Q13237 762 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 RPS6KA2Q15349 733 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 IMPG1Q17R60 797 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 COQ5Q5HYK3 327 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PRAMEF14Q5SWL7 426 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 IL23RQ5VWK5 629 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PRAMEF13Q5VWM6 474 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ATG9BQ674R7 924 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CYP20A1Q6UW02 462 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SUSD1Q6UWL2 747 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ENPP7Q6UWV6 458 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 TMPRSS11BQ86T26 416 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms