RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ATG4AQ8WYN0 398 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 C5orf34Q96MH7 638 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF285Q96NJ3 590 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 BARD1Q99728 777 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CARD6Q9BX69 1037 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FRMD8P1Q9BZ68 369 aaPredicted RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 SLC6A20Q9NP91 592 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ENAMQ9NRM1 1142 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 AGPAT4Q9NRZ5 378 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CUTCQ9NTM9 273 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 SLC2A6Q9UGQ3 507 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CDC23Q9UJX2 597 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 KLHL20Q9Y2M5 609 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 COPG1Q9Y678 874 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CENPEQ02224 2701 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 FITM1A5D6W6 292 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 MASP2O00187 686 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SOCS6O14544 535 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 PRMT5O14744 637 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 RASGRF2O14827 1237 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 LIASO43766 372 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SLCO2B1O94956 709 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CLDN1O95832 211 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 IFNB1P01574 187 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 AOAHP28039 575 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 DCTP40126 519 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TTPAP49638 278 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SEMA3AQ14563 771 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SF1Q15637 639 aaKnown RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 OASLQ15646 514 aaKnown RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 NKG7Q16617 165 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TUBB8Q3ZCM7 444 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 AGAP7PQ5VUJ5 663 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 B3GNTL1Q67FW5 361 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 FCRL6Q6DN72 434 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 FIGLAQ6QHK4 219 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 IGFL2Q6UWQ7 119 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TAX1BP1Q86VP1 789 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TMEM151BQ8IW70 566 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TTC29Q8NA56 475 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF511Q8NB15 262 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 ST6GALNAC3Q8NDV1 305 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 PPHLN1Q8NEY8 458 aaKnown RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 OR6P1Q8NGX9 317 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CFAP61Q8NHU2 1237 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 HES6Q96HZ4 224 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 VPS50Q96JG6 964 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF778Q96MU6 729 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 AGAP4Q96P64 663 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 IL17FQ96PD4 163 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SELENOSQ9BQE4 189 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 ZBTB20Q9HC78 741 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SEMA3GQ9NS98 782 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 IL1RAPL1Q9NZN1 696 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CTSFQ9UBX1 484 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CIDEBQ9UHD4 219 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 SLC39A10Q9ULF5 831 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
PRKCB-208ENST00000487674 NTNG1Q9Y2I2 539 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 MRFAP1Q9Y605 127 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 HS3ST3B1Q9Y662 390 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 FAM169AQ9Y6X4 670 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CNTRLQ7Z7A1 2325 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
PRKCB-208ENST00000487674 IQCF5A8MTL0 148 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 TARM1B6A8C7 271 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 KPNA5O15131 536 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 ALOX12BO75342 701 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 F12P00748 615 aaPredicted RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 APRTP07741 180 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 MCM3P25205 808 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 GRIA1P42261 906 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 TSFMP43897 325 aaKnown RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 GLRBP48167 497 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 RBBP7Q16576 425 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 HIF1AQ16665 826 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 SEL1L2Q5TEA6 688 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 TTC23LQ6PF05 361 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 KIRREL2Q6UWL6 708 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 LRRC6Q86X45 466 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 KRT222Q8N1A0 295 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 MPP5Q8N3R9 675 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 RAB42Q8N4Z0 105 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 C2orf73Q8N5S3 287 aaPredicted RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 LMNTD1Q8N9Z9 388 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 GSDMBQ8TAX9 411 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 HMGCLL1Q8TB92 370 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 ZUFSPQ96AP4 578 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 PANX3Q96QZ0 392 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 BAG1Q99933 345 aaPredicted RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 LHPPQ9H008 270 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 EPS8L2Q9H6S3 715 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms