RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SH3BGRL2Q9UJC5 107 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 C3orf18Q9UK00 162 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 KLK4Q9Y5K2 254 aa14.64□□□□□ -0.07
MCF2L-228ENST00000487354 LOC105369274A0A096LPK9 316 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 IGHV1-45A0A0A0MS14 117 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 LOC102723532A0A0G2JNH3 316 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 KRT87PA6NCN2 255 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 MROH6A6NGR9 719 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 KCNN4O15554 427 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 ZRANB2O95218 330 aaKnown RBP eCLIP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 WDPCPO95876 746 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 S1PR4O95977 384 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 SERPINA7P05543 415 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 PSMB5P28074 263 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 CCR7P32248 378 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 CSE1LP55060 971 aaKnown RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 VSX2P58304 361 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 SYTL3Q4VX76 610 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 DNAJC21Q5F1R6 531 aaKnown RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 WASHC2DQ5SRD0 308 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 CAVIN1Q6NZI2 390 aaKnown RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 NDUFAF7Q7L592 441 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 TMTC1Q8IUR5 882 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 OR4N4Q8N0Y3 316 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 TTC29Q8NA56 475 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 OR2L8Q8NGY9 312 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF304Q9HCX3 659 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 ABHD10Q9NUJ1 306 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 PIH1D1Q9NWS0 290 aaKnown RBP14.63□□□□□ -0.07
MCF2L-228ENST00000487354 IL1RAPL1Q9NZN1 696 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 SEC14L3Q9UDX4 400 aa14.63□□□□□ -0.07
MCF2L-228ENST00000487354 DNHD1Q96M86 4753 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 NSG1A0A0A6YYJ2 146 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 DYTNA2CJ06 578 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 HYKKA2RU49 373 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 CCDC162PA2VCL2 907 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 QSOX1O00391 747 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 FFAR3O14843 346 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 GPR42O15529 346 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 PJA2O43164 708 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 GPC4O75487 556 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 ITGAMP11215 1152 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 MSNP26038 577 aaKnown RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 YBX1P67809 324 aaKnown RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 EEF1A2Q05639 463 aaKnown RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 PRPSAP1Q14558 356 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 POU6F1Q14863 301 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 C3AR1Q16581 482 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 ZC3H12BQ5HYM0 836 aaKnown RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 HIBCHQ6NVY1 386 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 RNF44Q7L0R7 432 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 CDKL3Q8IVW4 592 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 DCUN1D3Q8IWE4 304 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 OR13J1Q8NGT2 312 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 ADAMTS18Q8TE60 1221 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 STYXQ8WUJ0 223 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 MIEF2Q96C03 454 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 RNF32Q9H0A6 362 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF282Q9UDV7 671 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 TINAGQ9UJW2 476 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 INTUQ9ULD6 942 aa14.62□□□□□ -0.07
MCF2L-228ENST00000487354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.62□□□□□ -0.07
MCF2L-228ENST00000487354 RASGRF2O14827 1237 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 SLC19A2O60779 497 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 BMP10O95393 424 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 METTL18O95568 372 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 RBP3P10745 1247 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 AGAP20933 346 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 FDXRP22570 491 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 PLOD1Q02809 727 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-228ENST00000487354 SEMA3AQ14563 771 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 PCOLCEQ15113 449 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.61□□□□□ -0.07
MCF2L-228ENST00000487354 CCSMST1Q4G0I0 132 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 MTFR2Q6P444 385 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 XKRXQ6PP77 449 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 NCCRP1Q6ZVX7 275 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-228ENST00000487354 ARHGEF39Q8N4T4 335 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 AMER3Q8N944 861 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 DNAJB8Q8NHS0 232 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 POM121Q96HA1 1249 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-228ENST00000487354 TFR2Q9UP52 801 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF835Q9Y2P0 537 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 HCFC1P51610 2035 aa14.61□□□□□ -0.07
MCF2L-228ENST00000487354 LOC102723996A0A087X1L8 192 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 A0A1W2PPV9 198 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 IQCF5A8MTL0 148 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 IDSB3KWA1 339 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 TARM1B6A8C7 271 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 GOLGA6L22H0YM25 854 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 RASAL1O95294 804 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 OR56A5P0C7T3 313 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SSTR2P30874 369 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 EIF3EP60228 445 aaKnown RBP14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SNRPNP63162 240 aaKnown RBP14.6□□□□□ -0.07
MCF2L-228ENST00000487354 OCA2Q04671 838 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SF1Q15637 639 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms