RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 IL1BP01584 269 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 IGLV3-19P01714 112 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 ANXA6P08133 673 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 IL6RP08887 468 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 NR2F6P10588 404 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CCNCP24863 283 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CHRNA3P32297 505 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 SLC8A1P32418 973 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 ACSL1P33121 698 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 DRD3P35462 400 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 GARSP41250 739 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CCT5P48643 541 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CCNHP51946 323 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 POLE2P56282 527 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC173Q0VFZ6 552 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 ELAVL3Q14576 367 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 IHHQ14623 411 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 PTPRRQ15256 657 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CST6Q15828 149 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 LPAL2Q16609 132 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 POM121L1PQ3SYA9 428 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 PLK5Q496M5 336 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 TFDP3Q5H9I0 405 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF776Q68DI1 518 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 KIAA1324Q6UXG2 1013 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 KBTBD6Q86V97 674 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 LRRC49Q8IUZ0 686 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 SYCE1Q8N0S2 351 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 GALNT15Q8N3T1 639 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 PGBD5Q8N414 524 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 AADATQ8N5Z0 425 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 TEX26Q8N6G2 289 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 METTL25Q8N6Q8 603 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 PCDH20Q8N6Y1 951 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 SUMF1Q8NBK3 374 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 OR2AP1Q8NGE2 309 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 OR1N1Q8NGS0 311 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 STT3BQ8TCJ2 826 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 OR8D1Q8WZ84 308 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 RUBCNQ92622 972 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 ARRDC3Q96B67 414 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 TSGA13Q96PP4 275 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 C10orf88Q9H8K7 445 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 UBA2Q9UBT2 640 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 STEAP1Q9UHE8 339 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 HEY1Q9Y5J3 304 aa6.17□□□□□ -1.42
RTFDC1-209ENST00000487211 CELSR3Q9NYQ7 3312 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 MIF4GDA9UHW6 222 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 C10orf142B7Z368 130 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ALOX15BO15296 676 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 RNASEH1O60930 286 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF217O75362 1048 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ACTL6BO94805 426 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 WDR47O94967 919 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 NXPH3O95157 252 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 GSRP00390 522 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 JCHAINP01591 159 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 DNTTP04053 509 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ACADMP11310 421 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ZFXP17010 805 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 AKT1P31749 480 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 SERPINB6P35237 376 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PTGER3P43115 390 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PSMD8P48556 350 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 CSNK1DP48730 415 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 NR2C2P49116 596 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 GEMIN4P57678 1058 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 TAS2R38P59533 333 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 MAXP61244 160 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 RHOAP61586 193 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ZBTB16Q05516 673 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PPIDQ08752 370 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 BMPR2Q13873 1038 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 HNRNPDQ14103 355 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 SIM2Q14190 667 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 CLCA4Q14CN2 919 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 RPS6KA1Q15418 735 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 P3H1Q32P28 736 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ODF2Q5BJF6 829 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 MARC1Q5VT66 337 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 Q6ZNX1 250 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 BBS12Q6ZW61 710 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC50Q8IVM0 306 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 NRSN1Q8IZ57 195 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 HDDC3Q8N4P3 179 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 CCNYQ8ND76 341 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 FAM131CQ96AQ9 280 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 HAUS1Q96CS2 278 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 HDAC11Q96DB2 347 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 RBM41Q96IZ5 413 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PBKQ96KB5 322 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF599Q96NL3 588 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 OLFM3Q96PB7 478 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PSKH2Q96QS6 385 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 FAM118BQ9BPY3 351 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 FAM167BQ9BTA0 163 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms