RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 FITM1A5D6W6 292 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 ARHGEF33A8MVX0 844 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 MYO1CO00159 1063 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 ZNF185O15231 689 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 ALBP02768 609 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 CATP04040 527 aaKnown RBP18.3■□□□□ 0.52
CLIP2-206ENST00000487091 ALAS2P22557 587 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 PSMB5P28074 263 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 OTX2P32243 289 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 CTBP1Q13363 440 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 ARHGAP19Q14CB8 494 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 IGFBP7Q16270 282 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 FAM214AQ32MH5 1076 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 TTLL10Q6ZVT0 673 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 MRGPREQ86SM8 312 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 DENND6AQ8IWF6 608 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 AGGF1Q8N302 714 aaeCLIP18.3■□□□□ 0.52
CLIP2-206ENST00000487091 FDCSPQ8NFU4 85 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 KCNJ9Q92806 393 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 FKBP10Q96AY3 582 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 NACC2Q96BF6 587 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 FER1L6-AS2Q96M78 137 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 MIPEPQ99797 713 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 SELENOSQ9BQE4 189 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 CCDC68Q9H2F9 335 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 SLC22A11Q9NSA0 550 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 MAD1L1Q9Y6D9 718 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 COMMD10Q9Y6G5 202 aa18.3■□□□□ 0.52
CLIP2-206ENST00000487091 KRT87PA6NCN2 255 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 DSCR3O14972 297 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 CTSVO60911 334 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 CNOT3O75175 753 aaKnown RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 HSD17B2P37059 387 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 FASTKQ14296 549 aaKnown RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 PPP1R7Q15435 360 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 COLEC12Q5KU26 742 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 RNASEH2BQ5TBB1 312 aaKnown RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 ZNF549Q6P9A3 640 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 OVCH1Q7RTY7 1134 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 TTC29Q8NA56 475 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 FBXO15Q8NCQ5 510 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 SMPDL3AQ92484 453 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 MIB2Q96AX9 1013 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 FBXO6Q9NRD1 293 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 CUTCQ9NTM9 273 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 C20orf96Q9NUD7 363 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 TSR3Q9UJK0 312 aaKnown RBP18.29■□□□□ 0.52
CLIP2-206ENST00000487091 FBXO5Q9UKT4 447 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 DHRS7Q9Y394 339 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 FAM169AQ9Y6X4 670 aa18.29■□□□□ 0.52
CLIP2-206ENST00000487091 HEATR5BQ9P2D3 2071 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 PEX12O00623 359 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 MPC1LP0DKB6 136 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 ENO3P13929 434 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-206ENST00000487091 TCP1P17987 556 aaKnown RBP18.28■□□□□ 0.52
CLIP2-206ENST00000487091 ITGAXP20702 1163 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 CMPK1P30085 196 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SLC1A2P43004 574 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 CD97P48960 835 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SLC9A5Q14940 896 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SLCO2A1Q92959 643 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SMAD5Q99717 465 aaKnown RBP18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SLC30A3Q99726 388 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 NUDT9Q9BW91 350 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 SLC26A1Q9H2B4 701 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 KCNF1Q9H3M0 494 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 WDR54Q9H977 334 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 TRMT1Q9NXH9 659 aaKnown RBP18.28■□□□□ 0.52
CLIP2-206ENST00000487091 GPR83Q9NYM4 423 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 ANKMY1Q9P2S6 941 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 MED16Q9Y2X0 877 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 PCSK5Q92824 1860 aa18.28■□□□□ 0.52
CLIP2-206ENST00000487091 OR2A25A4D2G3 310 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 A6NL46 340 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 ZNF839A8K0R7 811 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 DPM1O60762 260 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 UMODP07911 640 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 MCM3P25205 808 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 VSX2P58304 361 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-206ENST00000487091 DCAF10Q5QP82 559 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 WASHC2DQ5SRD0 308 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 RNF44Q7L0R7 432 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 PCGF5Q86SE9 256 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 GIMAP7Q8NHV1 300 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 ASB11Q8WXH4 323 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 INPP5DQ92835 1189 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 PKP4Q99569 1192 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 FAM167BQ9BTA0 163 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 P4HTMQ9NXG6 502 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 C5AR2Q9P296 337 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 PCYOX1Q9UHG3 505 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 PLAAQ9Y263 795 aa18.27■□□□□ 0.52
CLIP2-206ENST00000487091 A0A0J9YVX5 310 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 GFYI3L273 518 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 EIF3FO00303 357 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 DNALI1O14645 258 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 KLHL41O60662 606 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms