RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SKILP12757 684 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 DNASE1P24855 282 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 MCM3P25205 808 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ACRV1P26436 265 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 MSX1P28360 303 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 PEBP1P30086 187 aaKnown RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 PKLRP30613 574 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 CHRNB4P30926 498 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NR2C2P49116 596 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 GEMP55040 296 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 TAS2R40P59535 323 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 DYNLT1P63172 113 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 PTPRCAPQ14761 206 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NAA25Q14CX7 972 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 SF1Q15637 639 aaKnown RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 CEBPEQ15744 281 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 FILIP1LQ4L180 1135 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ZNF658BQ4V348 819 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 FAM182AQ5T1J6 154 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 TMEM211Q6ICI0 200 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NPNTQ6UXI9 565 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NAPRTQ6XQN6 538 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ARHGEF18Q6ZSZ5 1173 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NCCRP1Q6ZVX7 275 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 PID1Q7Z2X4 250 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 CLYBLQ8N0X4 340 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 RAB42Q8N4Z0 105 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 RAPGEF5Q92565 580 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 MVB12AQ96EY5 273 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 RMND5BQ96G75 393 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 ZNF354BQ96LW1 612 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ZNF285Q96NJ3 590 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ALPK1Q96QP1 1244 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 DMRTA2Q96SC8 542 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 UTP23Q9BRU9 249 aaKnown RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 TMEM121Q9BTD3 319 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 FICDQ9BVA6 458 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 YIPF2Q9BWQ6 316 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 RAB11FIP5Q9BXF6 653 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 TSPAN10Q9H1Z9 355 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 KCNJ16Q9NPI9 418 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 CCM2LQ9NUG4 571 aaPredicted RBP7.28□□□□□ -1.24
PDPN-205ENST00000487038 RSPH14Q9UHP6 348 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 MKL2Q9ULH7 1088 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 PLAGL1Q9UM63 463 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NPIPA1Q9UND3 350 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 CDC14AQ9UNH5 594 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ZANQ9Y493 2812 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 IGLV3-16A0A075B6K0 115 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ASPDHA6ND91 283 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 FAM90A27PA6NNH2 459 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 TARM1B6A8C7 271 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ASNA1O43681 348 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 VPS26AO75436 327 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ANXA9O76027 345 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 SUN1O94901 812 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 SLCO2B1O94956 709 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 KRT1P04264 644 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 CELA2AP08217 269 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ANXA5P08758 320 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ZNF24P17028 368 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 CD9P21926 228 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ACADLP28330 430 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 MC4RP32245 332 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 VSX2P58304 361 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 XIAPP98170 497 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 LTBQ06643 244 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 OLIG2Q13516 323 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 NFKBIBQ15653 356 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 MEP1AQ16819 746 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 WASHC2DQ5SRD0 308 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 E4F1Q66K89 784 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 ITPRIPL1Q6GPH6 555 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 FIGLAQ6QHK4 219 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 APTXQ7Z2E3 356 aaKnown RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 TAX1BP1Q86VP1 789 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 SERPINA9Q86WD7 417 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 DOLPP1Q86YN1 238 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 DMRTC2Q8IXT2 367 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 MYRIPQ8NFW9 859 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 OR13C4Q8NGS5 318 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 METTL21AQ8WXB1 218 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 NANOS1Q8WY41 292 aaKnown RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 CTNNBL1Q8WYA6 563 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 ZUFSPQ96AP4 578 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 SCMH1Q96GD3 660 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 OXNAD1Q96HP4 312 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 CABS1Q96KC9 395 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 FERMT1Q9BQL6 677 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 MESP1Q9BRJ9 268 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ZNF700Q9H0M5 742 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 GSX1Q9H4S2 264 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 FAM96AQ9H5X1 160 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 MKKSQ9NPJ1 570 aaPredicted RBP7.27□□□□□ -1.25
PDPN-205ENST00000487038 KLHL1Q9NR64 748 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 ANO10Q9NW15 660 aa7.27□□□□□ -1.25
PDPN-205ENST00000487038 DNAJB12Q9NXW2 375 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms