RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CYP2A13Q16696 494 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 TCTE1Q5JU00 501 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 WASHC2DQ5SRD0 308 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 TTC27Q6P3X3 843 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 CASC4Q6P4E1 433 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 COX15Q7KZN9 410 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 CAND1Q86VP6 1230 aaKnown RBP23.51■■□□□ 1.35
LIME1-206ENST00000487026 RAB42Q8N4Z0 105 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 OR2A1Q8NGT9 310 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 C19orf60Q96EN9 201 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 PSMG3-AS1Q96PY0 264 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 ZNF552Q9H707 407 aaPredicted RBP23.51■■□□□ 1.35
LIME1-206ENST00000487026 C5AR2Q9P296 337 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 STOX2Q9P2F5 926 aaPredicted RBP23.51■■□□□ 1.35
LIME1-206ENST00000487026 LOC105369274A0A096LPK9 316 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 LOC102723532A0A0G2JNH3 316 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 A0A0J9YVX5 310 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 IGHEP01854 428 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 KRT14P02533 472 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 CCNFP41002 786 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 NKG7Q16617 165 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 KIAA0930Q6ICG6 404 aaPredicted RBP23.5■■□□□ 1.35
LIME1-206ENST00000487026 CENPUQ71F23 418 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 OR4N4Q8N0Y3 316 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 TTC29Q8NA56 475 aaPredicted RBP23.5■■□□□ 1.35
LIME1-206ENST00000487026 OR2L3Q8NG85 312 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 HMGCLL1Q8TB92 370 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 MS4A14Q96JA4 679 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 ZNF285Q96NJ3 590 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 TCF12Q99081 682 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 ACAT2Q9BWD1 397 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 SOX17Q9H6I2 414 aaPredicted RBP23.5■■□□□ 1.35
LIME1-206ENST00000487026 ZBTB20Q9HC78 741 aaPredicted RBP23.5■■□□□ 1.35
LIME1-206ENST00000487026 ATP13A2Q9NQ11 1180 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 ZC3H7BQ9UGR2 993 aaKnown RBP23.5■■□□□ 1.35
LIME1-206ENST00000487026 CDC23Q9UJX2 597 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 PPP2R2CQ9Y2T4 447 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 MRFAP1Q9Y605 127 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 MAU2Q9Y6X3 613 aa23.5■■□□□ 1.35
LIME1-206ENST00000487026 TCP11X1B4DZS4 312 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 AGPSO00116 658 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 MED26O95402 600 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 MATN4O95460 622 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 ONECUT2O95948 504 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 ESR1P03372 595 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 PIM1P11309 404 aaPredicted RBP23.49■■□□□ 1.35
LIME1-206ENST00000487026 GP1BBP13224 206 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 SARNPP82979 210 aaKnown RBP23.49■■□□□ 1.35
LIME1-206ENST00000487026 GBX1Q14549 363 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 ACSBG2Q5FVE4 666 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 RNF187Q5TA31 235 aaPredicted RBP23.49■■□□□ 1.35
LIME1-206ENST00000487026 FHL5Q5TD97 284 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 NEPROQ6NW34 567 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 MAGEC3Q8TD91 643 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 FKBP10Q96AY3 582 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 SPSB2Q99619 263 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 CTSFQ9UBX1 484 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 FBXL4Q9UKA2 621 aa23.49■■□□□ 1.35
LIME1-206ENST00000487026 FITM1A5D6W6 292 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 H3BMM5 538 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 GOLGA8MH3BSY2 632 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 PFDN6O15212 129 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 SRPX2O60687 465 aaPredicted RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 AGFG2O95081 481 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 FKBP9O95302 570 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 ALBP02768 609 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 EIF2S1P05198 315 aaKnown RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 PKMP14618 531 aaKnown RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 MMP11P24347 488 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 MAGEA6P43360 314 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 MRPL49Q13405 166 aaKnown RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 KLHL38Q2WGJ6 581 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 YOD1Q5VVQ6 348 aaPredicted RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 SUSD1Q6UWL2 747 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 CILP2Q8IUL8 1156 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 OR9A1PQ8NGU1 263 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 MAGOHBQ96A72 148 aaKnown RBP23.48■■□□□ 1.35
LIME1-206ENST00000487026 LRRC4CQ9HCJ2 640 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 SLC6A20Q9NP91 592 aa23.48■■□□□ 1.35
LIME1-206ENST00000487026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 HYKKA2RU49 373 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 ARHGEF33A8MVX0 844 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 SOCS6O14544 535 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 ALPPP05187 535 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 OGNP20774 298 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 ITGA3P26006 1051 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 ADARP55265 1226 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 TSTA3Q13630 321 aaPredicted RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 DHX34Q14147 1143 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 EIF2S3LQ2VIR3 472 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 FAM214AQ32MH5 1076 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 FBXO42Q6P3S6 717 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 CISD2Q8N5K1 135 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 ZNF669Q96BR6 464 aaPredicted RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 SLC30A3Q99726 388 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 DPH7Q9BTV6 452 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 WDR54Q9H977 334 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 SPATA7Q9P0W8 599 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 SAMD15Q9P1V8 674 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms