RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 THOC7Q6I9Y2 204 aaKnown RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ADNP2Q6IQ32 1131 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 KLHDC8BQ8IXV7 354 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 METTL4Q8N3J2 472 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ATP6V0D2Q8N8Y2 350 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 VANGL1Q8TAA9 524 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 FOXJ1Q92949 421 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 EID2BQ96D98 161 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF382Q96SR6 550 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TSEN34Q9BSV6 310 aaKnown RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 FHP07954 510 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 RPL17P18621 184 aaKnown RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 SLC19A1P41440 591 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 HSPA14Q0VDF9 509 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 DUSP4Q13115 394 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 EIF4EBP2Q13542 120 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 TAF12Q16514 161 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF404Q494X3 552 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 MON1AQ86VX9 555 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 TTC30BQ8N4P2 665 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 PANX1Q96RD7 426 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 MTERF1Q99551 399 aaKnown RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 AASDHPPTQ9NRN7 309 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 UBA2Q9UBT2 640 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 RAPGEFL1Q9UHV5 662 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 TMED5Q9Y3A6 229 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 GPSM3Q9Y4H4 160 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 GJB5O95377 273 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 KRT8P05787 483 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 IL10RBQ08334 325 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 COQ5Q5HYK3 327 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 OR2T5Q6IEZ7 315 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 SBSNQ6UWP8 590 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 PARP16Q8N5Y8 322 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 DPP10Q8N608 796 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 OR2T29Q8NH02 315 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 GTPBP3Q969Y2 492 aaKnown RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 APIPQ96GX9 242 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 HSH2DQ96JZ2 352 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 NUSAP1Q9BXS6 441 aaKnown RBP12.06□□□□□ -0.48
HSPG2-211ENST00000486901 MUC13Q9H3R2 512 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 ASB8Q9H765 288 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 USE1Q9NZ43 259 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
HSPG2-211ENST00000486901 FAM227AF5H4B4 570 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 F5H5T6 163 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 IFRD1O00458 451 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PRAMEF11O60813 436 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 UPK1BO75841 260 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PDYNP01213 254 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 CSF2P04141 144 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 TACR2P21452 398 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PPP5CP53041 499 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 USP43Q70EL4 1123 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 GDPD3Q7L5L3 318 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 SLC44A2Q8IWA5 706 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 GOLM1Q8NBJ4 401 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 YIPF6Q96EC8 236 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 THUMPD1Q9NXG2 353 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PPT2Q9UMR5 302 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 RGS14O43566 566 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 ENGP17813 658 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 OGNP20774 298 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 HOXA9P31269 272 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 SUOXP51687 545 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 RFLNAQ6ZTI6 216 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 SERPINA9Q86WD7 417 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 CCDC117Q8IWD4 279 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 BTN2A3PQ96KV6 586 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 CLPBQ9H078 707 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 RNF6Q9Y252 685 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PPP2R3BQ9Y5P8 575 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PDZK1P1A8MUH7 402 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 WWP2O00308 870 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 IDH3BO43837 385 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 WBP4O75554 376 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 PRAMEF1O95521 474 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 OTCP00480 354 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 HOXD9P28356 352 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 S100A5P33763 92 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 GATMP50440 423 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF135P52742 658 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 GANABQ14697 944 aaKnown RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 MAD2L1BPQ15013 274 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-211ENST00000486901 KIAA0040Q15053 153 aa12.05□□□□□ -0.48
HSPG2-211ENST00000486901 TYSND1Q2T9J0 566 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms