RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PLCL1Q15111 1095 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC157Q569K6 752 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 EFL1Q7Z2Z2 1120 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 ADGRF3Q8IZF5 1079 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 AVL9Q8NBF6 648 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 OR56A3Q8NH54 315 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 RDH11Q8TC12 318 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC74AQ96AQ1 378 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PYCR2Q96C36 320 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 PAIP2Q9BPZ3 127 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 TWSG1Q9GZX9 223 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SRMSQ9H3Y6 488 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 STN1Q9H668 368 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 OXSMQ9NWU1 459 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SPHK1Q9NYA1 384 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 NKIRAS1Q9NYS0 192 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 NCKIPSDQ9NZQ3 722 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 OGFRQ9NZT2 677 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 LNPEPQ9UIQ6 1025 aa12.36□□□□□ -0.43
HDAC6-229ENST00000486665 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
HDAC6-229ENST00000486665 A0A1W2PPV9 198 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 PRICKLE3O43900 615 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-229ENST00000486665 CHN1P15882 459 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 CKMT2P17540 419 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 POLR2CP19387 275 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ALDH4A1P30038 563 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 SHMT2P34897 504 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 HSD17B2P37059 387 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 HNMTP50135 292 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
HDAC6-229ENST00000486665 DAB2P98082 770 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 NR1D2Q14995 579 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ARHGAP19Q14CB8 494 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 SETDB1Q15047 1291 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 NKAIN2Q5VXU1 208 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ANKS6Q68DC2 871 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 SUSD1Q6UWL2 747 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
HDAC6-229ENST00000486665 KLHDC8AQ8IYD2 350 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 SYTL1Q8IYJ3 562 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 TCAIMQ8N3R3 496 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 OR6C4Q8NGE1 309 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ATL1Q8WXF7 558 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 CDC6Q99741 560 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 CD244Q9BZW8 370 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 INTS7Q9NVH2 962 aaKnown RBP12.35□□□□□ -0.43
HDAC6-229ENST00000486665 HRASLS2Q9NWW9 162 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 WWOXQ9NZC7 414 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 TMCO1Q9UM00 188 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
HDAC6-229ENST00000486665 KALRNO60229 2985 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 IGHV1OR21-1A0A087WYE8 117 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 STX16-NPEPL1H3BU86 382 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 STX16O14662 325 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 KDM1AO60341 852 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 STK16O75716 305 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 IPO13O94829 963 aaKnown RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 UBXN7O94888 489 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 CHRM5P08912 532 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 PNLIPP16233 465 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 AMD1P17707 334 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 IMPDH1P20839 514 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 CD1CP29017 333 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 EEF1DP29692 281 aaKnown RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 GPR3P46089 330 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 DNAJB13P59910 316 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 PPP1CAP62136 330 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 YBX1P67809 324 aaKnown RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 CCL7P80098 99 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 NFKB2Q00653 900 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 CFHR1Q03591 330 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 TSTA3Q13630 321 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-229ENST00000486665 ZNF678Q5SXM1 525 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 CES4AQ5XG92 561 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 NUDCD3Q8IVD9 361 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 FAM20CQ8IXL6 584 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 RAB42Q8N4Z0 105 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 OR10G6Q8NH81 332 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 SMPDL3AQ92484 453 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 MED8Q96G25 268 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 TMEM237Q96Q45 408 aa12.34□□□□□ -0.43
HDAC6-229ENST00000486665 OR4K3Q96R72 315 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms