RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 CREB1P16220 341 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 IMPDH1P20839 514 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 HRH2P25021 359 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CXCR2P25025 360 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 EEF1DP29692 281 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 CMPK1P30085 196 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SLC19A1P41440 591 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 GPR3P46089 330 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 FASLGP48023 281 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SERPINB4P48594 390 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CCNG1P51959 295 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 EPHA4P54764 986 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 NAGLUP54802 743 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 HERVK_113P63132 956 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PHEXP78562 749 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 GPLD1P80108 840 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 NFKB2Q00653 900 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 DLG1Q12959 904 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 STX3Q13277 289 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 NAE1Q13564 534 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 GPR18Q14330 331 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 KIR2DS3Q14952 304 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SF1Q15637 639 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 CHI3L2Q15782 390 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PDK4Q16654 411 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CYP2A13Q16696 494 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PHKG1Q16816 387 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PPP1R3AQ16821 1122 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PAGE2BQ5JRK9 111 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 COLEC12Q5KU26 742 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 TTC19Q6DKK2 380 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 DUS1LQ6P1R4 473 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 OGFOD3Q6PK18 319 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 AGTRAPQ6RW13 159 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SBSNQ6UWP8 590 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CDHR3Q6ZTQ4 885 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 TMEM26Q6ZUK4 368 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 LRRC70Q7Z2Q7 622 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 ADCK2Q7Z695 626 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PLXDC1Q8IUK5 500 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 C10orf107Q8IVU9 208 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 NAGSQ8N159 534 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 KRT78Q8N1N4 520 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 TEX9Q8N6V9 391 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PDPRQ8NCN5 879 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 OR2L8Q8NGY9 312 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 WDR48Q8TAF3 677 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 ZDHHC12Q96GR4 267 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CNDP1Q96KN2 507 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CNDP2Q96KP4 475 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 APOLD1Q96LR9 279 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 ATOH8Q96SQ7 321 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CDC6Q99741 560 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 TRMOQ9BU70 441 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 ERVK-6Q9BXR3 956 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 CD244Q9BZW8 370 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 NSRP1Q9H0G5 558 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 ATG10Q9H0Y0 220 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 MANSC1Q9H8J5 431 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 UCK1Q9HA47 277 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 IL21RQ9HBE5 538 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 SLC40A1Q9NP59 571 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 DNAJC11Q9NVH1 559 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 DNAAF2Q9NVR5 837 aaKnown RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 HRASLS2Q9NWW9 162 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 AKAP7Q9P0M2 348 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 STOX2Q9P2F5 926 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 ADAMTS6Q9UKP5 1117 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 PNMA8BQ9ULN7 279 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 PCYT1BQ9Y5K3 369 aaPredicted RBP6.74□□□□□ -1.33
UBR4-214ENST00000486515 PLXNB3Q9ULL4 1909 aa6.74□□□□□ -1.33
UBR4-214ENST00000486515 LILRA5A6NI73 299 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 TMEM114B3SHH9 223 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 SIGLEC6O43699 453 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 DLX3O60479 287 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 RASSF9O75901 435 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 FKBP9O95302 570 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 WISP3O95389 354 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 VIMP08670 466 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 GNAZP19086 355 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 POLR2CP19387 275 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 CDH3P22223 829 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 HSPA7P48741 367 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 CSRP3P50461 194 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 MAZP56270 477 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 DNAJB13P59910 316 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 ABATP80404 500 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 BNC1Q01954 994 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 IRF8Q02556 426 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 CDC16Q13042 620 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 LAPTM5Q13571 262 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 PCBP2Q15366 365 aaKnown RBP eCLIP6.73□□□□□ -1.331e-10■□□□□ 8.7
UBR4-214ENST00000486515 PTCHD3Q3KNS1 767 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 AMZ1Q400G9 498 aa6.73□□□□□ -1.33
UBR4-214ENST00000486515 ZNF658BQ4V348 819 aaPredicted RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
UBR4-214ENST00000486515 PRAMEF13Q5VWM6 474 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms