RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SYNPO2LQ9H987 977 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 SLC6A20Q9NP91 592 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 INTS7Q9NVH2 962 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 OARD1Q9Y530 152 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 B3GALT1Q9Y5Z6 326 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 HEATR5BQ9P2D3 2071 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 IGKV1-8A0A0C4DH67 115 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 PABPN1LA6NDY0 278 aaKnown RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 LRRC14BA6NHZ5 514 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 KDM1AO60341 852 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 SUPT3HO75486 399 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 NUDT17P0C025 328 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 NELFEP18615 380 aaKnown RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 RPA3P35244 121 aaPredicted RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 ARL4DP49703 201 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 AGTR2P50052 363 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 CDHR3Q6ZTQ4 885 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 ADAMTSL2Q86TH1 951 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 GPSM1Q86YR5 675 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 RAB42Q8N4Z0 105 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 BMPERQ8N8U9 685 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 FBXO15Q8NCQ5 510 aaPredicted RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 OR2L3Q8NG85 312 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 WDR36Q8NI36 951 aaKnown RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 SMPDL3AQ92484 453 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 GATA6Q92908 595 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 USP7Q93009 1102 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 SCYL1Q96KG9 808 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 CCDC138Q96M89 665 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 OR4K3Q96R72 315 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 RAB11FIP5Q9BXF6 653 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 POLR1BQ9H9Y6 1135 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
APTX-227ENST00000485479 EURLQ9NYK6 297 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 CD274Q9NZQ7 290 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 XPR1Q9UBH6 696 aa11.44□□□□□ -0.58
APTX-227ENST00000485479 A0A087X1B8 175 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 A0A0J9YY10 115 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 IQANK1A0A1B0GTG1 560 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 C9orf172C9J069 976 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SLC16A5O15375 505 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 KLHL2O95198 593 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ZBTB11O95625 1053 aaPredicted RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 OAS2P29728 719 aaKnown RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 HSPA7P48741 367 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SHC2P98077 582 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 TUBB3Q13509 450 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 KIR2DS3Q14952 304 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 PTCHD3Q3KNS1 767 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 FCRL6Q6DN72 434 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ADCK2Q7Z695 626 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ISL2Q96A47 359 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 KIAA1191Q96A73 305 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 MOCOSQ96EN8 888 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SLC41A2Q96JW4 573 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ZIM3Q96PE6 472 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 TMEM79Q9BSE2 394 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 DPH7Q9BTV6 452 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 CCDC177Q9NQR7 707 aaPredicted RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 C1GALT1Q9NS00 363 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 STARD5Q9NSY2 213 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SDK2Q58EX2 2172 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 HGSO14964 777 aaPredicted RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 TAPBPO15533 448 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 CTSVO60911 334 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ANKRD34CP0C6C1 535 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ZNF28P17035 718 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 CNTFP26441 200 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 HSD11B2P80365 405 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ZNF844Q08AG5 666 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 TRA2AQ13595 282 aaKnown RBP eCLIP11.43□□□□□ -0.58
APTX-227ENST00000485479 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 BEND6Q5SZJ8 279 aaPredicted RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 PRAMEF13Q5VWM6 474 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 ICE2Q659A1 982 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 RPS27LQ71UM5 84 aaKnown RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 MREGQ8N565 214 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 KLHL6Q8WZ60 621 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 RHBDF1Q96CC6 855 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SLC46A1Q96NT5 459 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 DPYSL5Q9BPU6 564 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 TRIM54Q9BYV2 358 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 CENPHQ9H3R5 247 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 MRPS30Q9NP92 439 aaKnown RBP11.43□□□□□ -0.58
APTX-227ENST00000485479 ASCL3Q9NQ33 180 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 WWOXQ9NZC7 414 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 SLC22A14Q9Y267 594 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms