RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 COX6B1P14854 86 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 ACPPP15309 386 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 PSMB5P28074 263 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 HADHBP55084 474 aaKnown RBP12.28□□□□□ -0.44
UBR4-213ENST00000483922 SEMA3AQ14563 771 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 POU6F1Q14863 301 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 C3AR1Q16581 482 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 IRAK1BP1Q5VVH5 260 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 NDUFAF7Q7L592 441 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 SLC22A15Q8IZD6 547 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 OR2L8Q8NGY9 312 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 STYXQ8WUJ0 223 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 MIEF2Q96C03 454 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 C10orf90Q96M02 699 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 CHST11Q9NPF2 352 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
UBR4-213ENST00000483922 ABI3Q9P2A4 366 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 SEC14L3Q9UDX4 400 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
UBR4-213ENST00000483922 C3orf18Q9UK00 162 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 NXT1Q9UKK6 140 aaKnown RBP12.28□□□□□ -0.44
UBR4-213ENST00000483922 MRPS2Q9Y399 296 aaKnown RBP12.28□□□□□ -0.44
UBR4-213ENST00000483922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.28□□□□□ -0.444e-8■□□□□ 10.1
UBR4-213ENST00000483922 PCNX1Q96RV3 2341 aa12.27□□□□□ -0.44
UBR4-213ENST00000483922 NCOA6Q14686 2063 aaPredicted RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 IGHV1-45A0A0A0MS14 117 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 TRAV17A0A0B4J275 112 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 A0A1W2PPV9 198 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 SERPINA7P05543 415 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 RBP3P10745 1247 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 ITGAMP11215 1152 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 EIF3EP60228 445 aaKnown RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 PRPSAP1Q14558 356 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 ITIH4Q14624 930 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 SF1Q15637 639 aaKnown RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 KRTAP21-3Q3LHN1 58 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 CCDC38Q502W7 563 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 TCTE1Q5JU00 501 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 SPNS3Q6ZMD2 512 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 ZNF534Q76KX8 674 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 TMTC1Q8IUR5 882 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 OR13J1Q8NGT2 312 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 CFAP61Q8NHU2 1237 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 CCDC42Q96M95 316 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 SELENOSQ9BQE4 189 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 ABHD10Q9NUJ1 306 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 IL1RAPL1Q9NZN1 696 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.27□□□□□ -0.45
UBR4-213ENST00000483922 SLC2A6Q9UGQ3 507 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 KLK4Q9Y5K2 254 aa12.27□□□□□ -0.45
UBR4-213ENST00000483922 VPS13CQ709C8 3753 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 NSG1A0A0A6YYJ2 146 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 A0A0J9YVX5 310 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 SYCE3A1L190 88 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 TARM1B6A8C7 271 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 USP1O94782 785 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 BMP10O95393 424 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 S1PR4O95977 384 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 FTH1P02794 183 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 ST13P50502 369 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 EEF1A2Q05639 463 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 HSPA14Q0VDF9 509 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 PCOLCEQ15113 449 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 INAQ16352 499 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 FAM214AQ32MH5 1076 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 DNAJC21Q5F1R6 531 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 ZC3H12BQ5HYM0 836 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 FAAH2Q6GMR7 532 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 HIBCHQ6NVY1 386 aaPredicted RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 DARS2Q6PI48 645 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 XKRXQ6PP77 449 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 NLRP9Q7RTR0 991 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 ARHGEF39Q8N4T4 335 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 TTC29Q8NA56 475 aaPredicted RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 ACBD4Q8NC06 268 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 OR2A1Q8NGT9 310 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 DNAJB8Q8NHS0 232 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 ZUFSPQ96AP4 578 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 IMMP1LQ96LU5 166 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 SUCOQ9UBS9 1254 aaKnown RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 ZNF282Q9UDV7 671 aaPredicted RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 FEZ2Q9UHY8 353 aaPredicted RBP12.26□□□□□ -0.45
UBR4-213ENST00000483922 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 INTUQ9ULD6 942 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 ZNF835Q9Y2P0 537 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 NFS1Q9Y697 457 aa12.26□□□□□ -0.45
UBR4-213ENST00000483922 LOC102723996A0A087X1L8 192 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 DYTNA2CJ06 578 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 IDSB3KWA1 339 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 MAP2K7O14733 419 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 SRPX2O60687 465 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms