RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SRP72O76094 671 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 RHOBTB1O94844 696 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 FGF19O95750 216 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 MLYCDO95822 493 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CHEK2O96017 543 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 LPLP06858 475 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CHRNGP07510 517 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ITGA5P08648 1049 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ACADMP11310 421 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CD1DP15813 335 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZNF37AP17032 561 aaPredicted RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 SP100P23497 879 aaPredicted RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 EPHA3P29320 983 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 SLC6A4P31645 630 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 HNF4AP41235 474 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ABCG1P45844 678 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 CCR5P51681 352 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 POLE2P56282 527 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 HSD17B7P56937 341 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 SLC25A3Q00325 362 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CAP1Q01518 475 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 TRAP1Q12931 704 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 DLG1Q12959 904 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 COQ5Q5HYK3 327 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZNF678Q5SXM1 525 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 RBM20Q5T481 1227 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 VWA5B1Q5TIE3 1220 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 IRAK1BP1Q5VVH5 260 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZDHHC20Q5W0Z9 365 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 TTC23LQ6PF05 361 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 PRSS55Q6UWB4 352 aaPredicted RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 EP400NLQ6ZTU2 488 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 FAM217AQ8IXS0 508 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 PELI3Q8N2H9 469 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CPXM2Q8N436 756 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 DCAF4L2Q8NA75 395 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 GOT1L1Q8NHS2 421 aaPredicted RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 THAP4Q8WY91 577 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 KCNJ9Q92806 393 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ROPN1LQ96C74 230 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 SLC35A4Q96G79 324 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 PDLIM5Q96HC4 596 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 DNAJC1Q96KC8 554 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 OR52B2Q96RD2 323 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 OLFM1Q99784 485 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 G6PC3Q9BUM1 346 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 NUF2Q9BZD4 464 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 OR10A4Q9H209 315 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 Q9H521 79 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 MAGEE1Q9HCI5 957 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 NMRK1Q9NWW6 199 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZDHHC7Q9NXF8 308 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 DPP7Q9UHL4 492 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 POMPQ9Y244 141 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 TMEM5Q9Y2B1 443 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 PKP3Q9Y446 797 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 YIPF1Q9Y548 306 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 RAI2Q9Y5P3 530 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 A0A0D9SEW6 157 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 hCG_1807616A0A1W2PRN6 198 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 H3BUI4 141 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 GTPBP1O00178 669 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 PSMD12O00232 456 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 SDHDO14521 159 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 PRRG1O14668 218 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 CASQ2O14958 399 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 SOCS5O75159 536 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 TSPAN9O75954 239 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 KRT34O76011 436 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SUPT7LO94864 414 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 OLFM2O95897 454 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 C1RP00736 705 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 AMY2AP04746 511 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 RPSAP08865 295 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 HSPA8P11142 646 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 MBL2P11226 248 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 PKMP14618 531 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 AMY2BP19961 511 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ME2P23368 584 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 RPS3P23396 243 aaKnown RBP eCLIP7.55□□□□□ -1.2
SNX13-208ENST00000482558 NFKBIAP25963 317 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 TRHRP34981 398 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 KIR2DL1P43626 348 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 KIR2DL2P43627 348 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 HSPA13P48723 471 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 NUDT2P50583 147 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 CCR9P51686 369 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SUMO3P55854 103 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 NKX6-1P78426 367 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 CACNG1Q06432 222 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SULT2A1Q06520 285 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 LCP2Q13094 533 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 CYTH1Q15438 398 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SPOUT1Q5T280 376 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 ANKS6Q68DC2 871 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms