RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 DGKGP49619 791 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 ENTPD1P49961 510 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 CLCN7P51798 805 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 LSAMPQ13449 338 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 RAB33AQ14088 237 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 IER5LQ5T953 404 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 CAPN13Q6MZZ7 669 aaPredicted RBP8.9□□□□□ -0.98
CALD1-220ENST00000482470 ELMSAN1Q6PJG2 1045 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 GAREM2Q75VX8 874 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 R3HCC1LQ7Z5L2 792 aaKnown RBP8.9□□□□□ -0.98
CALD1-220ENST00000482470 ZNF683Q8IZ20 524 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 METTL25Q8N6Q8 603 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 SLCO4A1Q96BD0 722 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 PPCDCQ96CD2 204 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 DUSP26Q9BV47 211 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 SLC46A2Q9BY10 475 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 PLAGL1Q9UM63 463 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 CCL26Q9Y258 94 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 DLGAP4Q9Y2H0 992 aa8.9□□□□□ -0.98
CALD1-220ENST00000482470 ERN1O75460 977 aaKnown RBP8.9□□□□□ -0.99
CALD1-220ENST00000482470 ERAL1O75616 437 aaKnown RBP8.9□□□□□ -0.99
CALD1-220ENST00000482470 ASLP04424 464 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 TFPTP0C1Z6 253 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 PTPN2P17706 415 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 HTR1EP28566 365 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 HLA-FP30511 346 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 TTKP33981 857 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 CLCN2P51788 898 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 CAP1Q01518 475 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 GALNT18Q6P9A2 607 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 SBSNQ6UWP8 590 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 THOC6Q86W42 341 aaKnown RBP8.9□□□□□ -0.99
CALD1-220ENST00000482470 CHPFQ8IZ52 775 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 C12orf76Q8N812 135 aaPredicted RBP8.9□□□□□ -0.99
CALD1-220ENST00000482470 PIK3C3Q8NEB9 887 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 FRS2Q8WU20 508 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 SCRN2Q96FV2 425 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 NODALQ96S42 347 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 SMAD5Q99717 465 aaKnown RBP8.9□□□□□ -0.99
CALD1-220ENST00000482470 TTLL2Q9BWV7 592 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 SPATA7Q9P0W8 599 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 OGDHLQ9ULD0 1010 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 PCDHB14Q9Y5E9 798 aa8.9□□□□□ -0.99
CALD1-220ENST00000482470 TRBV23OR9-2A0A075B6M9 112 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 OR7A17O14581 309 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 B3GALT4O96024 378 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 IGLV3-27P01718 113 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 EPHX1P07099 455 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CLTBP09497 229 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 BMP1P13497 986 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ZNF24P17028 368 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 ALDH3A2P51648 485 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 EPS8Q12929 822 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CSTF3Q12996 717 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 NR1D2Q14995 579 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ZBED5Q49AG3 693 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CCDC92Q53HC0 331 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 NOXRED1Q6NXP6 359 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 VTCN1Q7Z7D3 282 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ZCCHC7Q8N3Z6 543 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 CSGALNACT1Q8TDX6 532 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 TFAP2CQ92754 450 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CD320Q9NPF0 282 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ARMC1Q9NVT9 282 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 DUS2Q9NX74 493 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 ELOVL2Q9NXB9 296 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 GPRC5BQ9NZH0 403 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 DEC1Q9P2X7 70 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 TMCC3Q9ULS5 477 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 MMP20O60882 483 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 MITFO75030 526 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 SOCS5O75159 536 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 RASAL1O95294 804 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 FABP3P05413 133 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 NAT1P18440 290 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CR2P20023 1033 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 POLR2IP36954 125 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 YBX1P67809 324 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 CNTN1Q12860 1018 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 PCBP2Q15366 365 aaKnown RBP eCLIP8.89□□□□□ -0.991e-7■□□□□ 10.9
CALD1-220ENST00000482470 ATP6AP1Q15904 470 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 PAGE2BQ5JRK9 111 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 LHX8Q68G74 356 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CCSAPQ6IQ19 270 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 HIPK1Q86Z02 1210 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 MMAAQ8IVH4 418 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 TCAIMQ8N3R3 496 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 PACRGLQ8N7B6 248 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 SMYD1Q8NB12 490 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 LEMD2Q8NC56 503 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CNIH3Q8TBE1 160 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CXorf40AQ8TE69 158 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 SMG7Q92540 1137 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 IRF7Q92985 503 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 AGPAT4Q9NRZ5 378 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 IMP3Q9NV31 184 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms