RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CCDC74BQ96LY2 380 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 FAM111AQ96PZ2 611 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 MAP3K3Q99759 626 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 MRPL57Q9BQC6 102 aaKnown RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 TMEM79Q9BSE2 394 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 MLXIPLQ9NP71 852 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 OR6C2Q9NZP2 312 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SENP1Q9P0U3 644 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SH2B3Q9UQQ2 575 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 A0A1W2PPV9 198 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 FAM221BA6H8Z2 402 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 E7ENX8 843 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 NTN3O00634 580 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PRAMEF10O60809 474 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 SIX3O95343 332 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PROCP04070 461 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 SBK3P0C264 359 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ERGP11308 486 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 MTHFD2P13995 350 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 OAS2P29728 719 aaKnown RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PRDX3P30048 256 aaKnown RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 LSSP48449 732 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 CDKL1Q00532 357 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 E2F1Q01094 437 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 TAP2Q03519 686 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ILKQ13418 452 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ARHGAP19Q14CB8 494 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ZXDCQ2QGD7 858 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 CACHD1Q5VU97 1274 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 SPESP1Q6UW49 350 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ZNF574Q6ZN55 896 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 RPS27LQ71UM5 84 aaKnown RBP12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ADCK2Q7Z695 626 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PDPRQ8NCN5 879 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 MGARPQ8TDB4 240 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 ATL1Q8WXF7 558 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 MOCOSQ96EN8 888 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 RNF31Q96EP0 1072 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 OR2A14Q96R47 310 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 EPB41L1Q9H4G0 881 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 POMT2Q9UKY4 750 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 GRID1Q9ULK0 1009 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
HDAC1-208ENST00000482310 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 A8MT66 165 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 DYNC1I1O14576 645 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 NRP2O60462 931 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PLIN3O60664 434 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 CSO75390 466 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 MT-CO3P00414 261 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 MYL2P10916 166 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 TAC1P20366 129 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 HSD17B2P37059 387 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PDX1P52945 283 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 FOXC1Q12948 553 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 KIR2DS3Q14952 304 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 CCDC153Q494R4 210 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 TNFAIP8L3Q5GJ75 292 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 AGBL2Q5U5Z8 902 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 KIAA1614Q5VZ46 1190 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 SULT1C3Q6IMI6 304 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 CAPN13Q6MZZ7 669 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 TMEM71Q6P5X7 295 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 WDR74Q6RFH5 385 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 THOC6Q86W42 341 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 LRRC56Q8IYG6 542 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 CNPY4Q8N129 248 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 FLVCR1-AS1Q8TAF5 88 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 ZDHHC12Q96GR4 267 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PKNOX2Q96KN3 472 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PAIP2Q9BPZ3 127 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 MECRQ9BV79 373 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 SLC6A20Q9NP91 592 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 INTS7Q9NVH2 962 aaKnown RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 CUEDC1Q9NWM3 386 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 SLC22A14Q9Y267 594 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 DYRK1BQ9Y463 629 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 MN1Q10571 1320 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-208ENST00000482310 SCN3AQ9NY46 2000 aa12.76□□□□□ -0.37
HDAC1-208ENST00000482310 IGHV5-51A0A0C4DH38 117 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 A0A0J9YY10 115 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 SLC9B1P1A6NJY1 282 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 MATN2O00339 956 aa12.75□□□□□ -0.37
HDAC1-208ENST00000482310 TYROBPO43914 113 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms