RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 NUP210LQ5VU65 1888 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 SPTA1P02549 2419 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 E5RI56 91 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 MATN4O95460 622 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 KRT14P02533 472 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 MMP11P24347 488 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 CMPK1P30085 196 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 BDKRB1P46663 353 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 YBX1P67809 324 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 GPS1Q13098 491 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 NKG7Q16617 165 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 TYSND1Q2T9J0 566 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 WASHC2DQ5SRD0 308 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 KIAA0930Q6ICG6 404 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 CASC4Q6P4E1 433 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 PPP1R32Q7Z5V6 425 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 OR2L3Q8NG85 312 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 OR2A1Q8NGT9 310 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 MIPEPQ99797 713 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 ENAMQ9NRM1 1142 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 LUZP4Q9P127 313 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 ZC3H7BQ9UGR2 993 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 FLNCQ14315 2725 aa12.88□□□□□ -0.35
CTDSP1-208ENST00000482272 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 A0A0J9YVX5 310 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 HYKKA2RU49 373 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 FITM1A5D6W6 292 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 NIPSNAP2O75323 286 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 AGFG2O95081 481 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 UMODP07911 640 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 MLNP12872 115 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 GP1BBP13224 206 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 MCM3P25205 808 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 PSMB5P28074 263 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 ATP5DP30049 168 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 UQCRFS1P47985 274 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 VPS41P49754 854 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 VSX2P58304 361 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 AIMP2Q13155 320 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 PLEKHN1Q494U1 663 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 IRAK1BP1Q5VVH5 260 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 NEPROQ6NW34 567 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 Q8NA96 180 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 OR9A1PQ8NGU1 263 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 MAGOHBQ96A72 148 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 PBKQ96KB5 322 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF285Q96NJ3 590 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF304Q9HCX3 659 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 KLK4Q9Y5K2 254 aa12.87□□□□□ -0.35
CTDSP1-208ENST00000482272 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 BLACEA4D250 179 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF839A8K0R7 811 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CTSVO60911 334 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 MED26O95402 600 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 EIF2S1P05198 315 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 ITGA3P26006 1051 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 HSD17B2P37059 387 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 MAGEA6P43360 314 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 OR1D4P47884 311 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 OCA2Q04671 838 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 GBX1Q14549 363 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 KLHL38Q2WGJ6 581 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 TTLL9Q3SXZ7 439 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 FBXO42Q6P3S6 717 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CENPUQ71F23 418 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CILP2Q8IUL8 1156 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 IQCKQ8N0W5 287 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 SMPDL3AQ92484 453 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms