RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PMS2P5A8MQ11 134 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ARPC2O15144 300 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 DDHD2O94830 711 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 CDH3P22223 829 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 CA6P23280 308 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ITGA3P26006 1051 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ALDH3A2P51648 485 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 VAMP7P51809 220 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 RASGEF1BQ0VAM2 473 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 TAZQ16635 292 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 PTGISQ16647 500 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 CTU2Q2VPK5 515 aaKnown RBP5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ZRANB3Q5FWF4 1079 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 SLC25A53Q5H9E4 307 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 USP43Q70EL4 1123 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 KBTBD8Q8NFY9 601 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 GRAPLQ8TC17 118 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-210ENST00000482158 KCNE4Q8WWG9 221 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 RAD54LQ92698 747 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ST6GALNAC6Q969X2 333 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 TMEM143Q96AN5 459 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 NSL1Q96IY1 281 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 FERMT1Q9BQL6 677 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 URM1Q9BTM9 101 aaKnown RBP5.14□□□□□ -1.59
SF3B1-210ENST00000482158 SLC52A3Q9NQ40 469 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 INTS9Q9NV88 658 aaKnown RBP5.14□□□□□ -1.59
SF3B1-210ENST00000482158 P4HTMQ9NXG6 502 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 GTF3C4Q9UKN8 822 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 C5orf52A6NGY3 159 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 C2orf81A6NN90 581 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 ZNF197O14709 1029 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 GPIP06744 558 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 TIA1P31483 386 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 RGS7P49802 495 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 MTCP1P56278 107 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 SQLEQ14534 574 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 UGCGQ16739 394 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 C1QTNF12Q5T7M4 302 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 FAM53AQ6NSI3 398 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 MOXD1Q6UVY6 613 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 PET117Q6UWS5 81 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 ENPP7Q6UWV6 458 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 TMEM182Q6ZP80 229 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 SLC16A9Q7RTY1 509 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 ANKRD33Q7Z3H0 272 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 APLFQ8IW19 511 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 HEXDCQ8WVB3 486 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 HPSE2Q8WWQ2 592 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 ZNF501Q96CX3 271 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 CITED2Q99967 270 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 PIGQQ9BRB3 760 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 GTPBP2Q9BX10 602 aaKnown RBP5.13□□□□□ -1.59
SF3B1-210ENST00000482158 CPVLQ9H3G5 476 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 LMAN1LQ9HAT1 526 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 GSN-AS1Q9NRJ2 163 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 FLRT3Q9NZU0 649 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 TXNDC16Q9P2K2 825 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 KCNJ14Q9UNX9 436 aa5.13□□□□□ -1.59
SF3B1-210ENST00000482158 WDR46O15213 610 aaKnown RBP5.12□□□□□ -1.59
SF3B1-210ENST00000482158 PRAF2O60831 178 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 AMBPP02760 352 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 PATE4P0C8F1 98 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 PRSS56P0CW18 603 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 GP1BBP13224 206 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 ANOS1P23352 680 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 HSD17B3P37058 310 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 RPL21P46778 160 aaKnown RBP5.12□□□□□ -1.59
SF3B1-210ENST00000482158 MFAP3P55082 362 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 KLC1Q07866 573 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 TNK1Q13470 666 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 FAM174BQ3ZCQ3 159 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 SHEQ5VZ18 495 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 ARHGAP17Q68EM7 881 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 APCDD1Q8J025 514 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 OR4C3Q8NH37 302 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 DNASE2BQ8WZ79 361 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 ERO1AQ96HE7 468 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 INPP5KQ9BT40 448 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 PRRG4Q9BZD6 226 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 ZWILCHQ9H900 591 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 GRPEL1Q9HAV7 217 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 FAM207AQ9NSI2 230 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-210ENST00000482158 KCNK7Q9Y2U2 307 aa5.12□□□□□ -1.59
SF3B1-210ENST00000482158 MYH14Q7Z406 1995 aaKnown RBP5.12□□□□□ -1.59
SF3B1-210ENST00000482158 PRR23D1E9PI22 279 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-210ENST00000482158 H0Y626 953 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 CCL24O00175 119 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 PSMD14O00487 310 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 SLC7A4O43246 635 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 DFFBO76075 338 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 CAVIN2O95810 425 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 CLPTM1O96005 669 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 SP1P08047 785 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 PRR23D2P0DMB1 279 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-210ENST00000482158 LBPP18428 481 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 PSMB4P28070 264 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 WNT5AP41221 380 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 TUBB4BP68371 445 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 TAF13Q15543 124 aa5.11□□□□□ -1.59
SF3B1-210ENST00000482158 PHKG1Q16816 387 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms