RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SYT15Q9BQS2 421 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 CLEC7AQ9BXN2 247 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 THAP2Q9H0W7 228 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 OR6C2Q9NZP2 312 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 WDR83OSQ9Y284 106 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 PPP2R2CQ9Y2T4 447 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 ZNF195O14628 629 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 CELF2O95319 508 aaKnown RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 ACSL3O95573 720 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 MYBL1P10243 752 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 ALDH3A2P51648 485 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 KLC1Q07866 573 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 AIMP1Q12904 312 aaKnown RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 VEZF1Q14119 521 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 PHKG1Q16816 387 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 KRT39Q6A163 491 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 FIP1L1Q6UN15 594 aaKnown RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 IL27RAQ6UWB1 636 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 BTN2A1Q7KYR7 527 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 LGI2Q8N0V4 545 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 OR4K1Q8NGD4 311 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 OR10G8Q8NGN5 311 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 AZIN2Q96A70 460 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 C10orf90Q96M02 699 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 MCRIP2Q9BUT9 160 aaKnown RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 PANK2Q9BZ23 570 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 TLE6Q9H808 572 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 PPANQ9NQ55 473 aaKnown RBP4.48□□□□□ -1.69
CALD1-219ENST00000480638 NKIRAS2Q9NYR9 191 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 WDR35Q9P2L0 1181 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 SWAP70Q9UH65 585 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 RNF215Q9Y6U7 377 aa4.48□□□□□ -1.69
CALD1-219ENST00000480638 A0A1W2PPK0 400 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 ANTXRLA6NF34 631 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 UBE2CO00762 179 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 CDK2AP2O75956 126 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 SEC24AO95486 1093 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 CLDN1O95832 211 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 TBX6O95947 436 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 CSN3P07498 182 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 IRF2P14316 349 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 LEPRP48357 1165 aaKnown RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 GSDMDP57764 484 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 POLR2LP62875 67 aaKnown RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 LCN1P1Q5VSP4 162 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 UGT3A1Q6NUS8 523 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 SLC30A6Q6NXT4 461 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 SLC25A47Q6Q0C1 308 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 G2E3Q7L622 706 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 KRT74Q7RTS7 529 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 PTAR1Q7Z6K3 402 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 LSMEM1Q8N8F7 131 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 SLC4A11Q8NBS3 891 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 OR10Q1Q8NGQ4 319 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 VANGL1Q8TAA9 524 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 SMAP2Q8WU79 429 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 TAF15Q92804 592 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALD1-219ENST00000480638 ZNF689Q96CS4 500 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 HDAC11Q96DB2 347 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 OTUB1Q96FW1 271 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 WBP1Q96G27 269 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 FAM71F1Q96KD3 344 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 FEVQ99581 238 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 TXLNGYQ9BZA5 131 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 TMX4Q9H1E5 349 aaPredicted RBP4.47□□□□□ -1.69
CALD1-219ENST00000480638 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 ANGPTL3Q9Y5C1 460 aa4.47□□□□□ -1.69
CALD1-219ENST00000480638 O00370 1275 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 CLDN4O14493 209 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 EPHB6O15197 1021 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 EXTL3O43909 919 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 SAGP10523 405 aaPredicted RBP4.46□□□□□ -1.7
CALD1-219ENST00000480638 EPCAMP16422 314 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 DPEP1P16444 411 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 EEF1B2P24534 225 aaKnown RBP4.46□□□□□ -1.7
CALD1-219ENST00000480638 RAB28P51157 221 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 PPP5CP53041 499 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 ACSM1Q08AH1 577 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 RASA2Q15283 850 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 NPTX1Q15818 432 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 KYNUQ16719 465 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 TCTE1Q5JU00 501 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 BSPRYQ5W0U4 402 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 ZNF772Q68DY9 489 aaPredicted RBP4.46□□□□□ -1.7
CALD1-219ENST00000480638 FAAP20Q6NZ36 180 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 TDRD5Q8NAT2 981 aaKnown RBP4.46□□□□□ -1.7
CALD1-219ENST00000480638 GPRC5AQ8NFJ5 357 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 MOCOSQ96EN8 888 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 CFAP57Q96MR6 1250 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 CCDC3Q9BQI4 270 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 PIGQQ9BRB3 760 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 PRRG4Q9BZD6 226 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 CHST11Q9NPF2 352 aa4.46□□□□□ -1.7
CALD1-219ENST00000480638 MAN2C1Q9NTJ4 1040 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms