RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 NACC2Q96BF6 587 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 L3HYPDHQ96EM0 354 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 SLC47A1Q96FL8 570 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 TMEM246Q9BRR3 403 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 THUMPD3Q9BV44 507 aaKnown RBP9.9□□□□□ -0.82
COMMD4-203ENST00000480484 OR2B2Q9GZK3 357 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 ACTR8Q9H981 624 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 RGS18Q9NS28 235 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 DNAJB9Q9UBS3 223 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 ADGRE2Q9UHX3 823 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.82
COMMD4-203ENST00000480484 PITPNM1O00562 1244 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 ANXA9O76027 345 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 NTRK1P04629 796 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 HLA-DQB2P05538 268 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 PRKCAP17252 672 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 POLR2EP19388 210 aaKnown RBP9.9□□□□□ -0.83
COMMD4-203ENST00000480484 TNFSF4P23510 183 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 GRIK1P39086 918 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 AGTR2P50052 363 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 EPHA4P54764 986 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 PPP2R2BQ00005 443 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 EMX2Q04743 252 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 EPS8Q12929 822 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 C18orf21Q32NC0 220 aaPredicted RBP9.9□□□□□ -0.83
COMMD4-203ENST00000480484 ZFP69Q49AA0 526 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 CXCL17Q6UXB2 119 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 TMEM179BQ7Z7N9 219 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 NXPE1Q8N323 547 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 ATPAF2Q8N5M1 289 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 FAM162AQ96A26 154 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 YIPF6Q96EC8 236 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 MYOCQ99972 504 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 TTYH2Q9BSA4 534 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 UGT2B28Q9BY64 529 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.83
COMMD4-203ENST00000480484 SCN3BQ9NY72 215 aa9.9□□□□□ -0.83
COMMD4-203ENST00000480484 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CENPBD1B2RD01 187 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 DNAJB5O75953 348 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 SNX4O95219 450 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 HPRP00739 348 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 APOA1P02647 267 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 SOD2P04179 222 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 S100A5P33763 92 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 HNF4AP41235 474 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 BRCC3P46736 316 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 OR2B6P58173 313 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 ACOX1Q15067 660 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 ZNF181Q2M3W8 571 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 FAM214AQ32MH5 1076 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 ZNF691Q5VV52 312 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 KANK2Q63ZY3 851 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 KIAA0930Q6ICG6 404 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TTC23LQ6PF05 361 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 GDPD3Q7L5L3 318 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 BHLHA9Q7RTU4 235 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 B3GNT8Q7Z7M8 397 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CIR1Q86X95 450 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 LACC1Q8IV20 430 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 FAM126BQ8IXS8 530 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 EID3Q8N140 333 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TRPV1Q8NER1 839 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TP53INP1Q96A56 240 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 AP5M1Q9H0R1 490 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TRPV4Q9HBA0 871 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 GLOD4Q9HC38 313 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 PLSCR3Q9NRY6 295 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 COQ3Q9NZJ6 369 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CORO2BQ9UQ03 480 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TPRKBQ9Y3C4 175 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 PRRC2BQ5JSZ5 2229 aaKnown RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TYW5A2RUC4 315 aaKnown RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 AGAP5A6NIR3 686 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CENPXA8MT69 81 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 PLD2O14939 933 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 PSMD3O43242 534 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 FAM20BO75063 409 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 POMCP01189 267 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 PFKLP17858 780 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CTGFP29279 349 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 CDC42EP1Q00587 391 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 SCARB2Q14108 478 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 MBTPS1Q14703 1052 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 OR4D1Q15615 310 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 COQ5Q5HYK3 327 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TPRG1LQ5T0D9 272 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 SLC22A25Q6T423 547 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 DET1Q7L5Y6 550 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 OR10A6Q8NH74 314 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 WDCPQ9H6R7 721 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 AGO3Q9H9G7 860 aaKnown RBP9.89□□□□□ -0.83
COMMD4-203ENST00000480484 TREX1Q9NSU2 369 aa9.89□□□□□ -0.83
COMMD4-203ENST00000480484 FAM105AQ9NUU6 356 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms