RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 THEMIS2Q5TEJ8 643 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 TMEM198Q66K66 360 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 CAPN13Q6MZZ7 669 aaPredicted RBP10.12□□□□□ -0.79
LINC00173-203ENST00000480237 IL27RAQ6UWB1 636 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 SCIMPQ6UWF3 145 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 TREML1Q86YW5 311 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 KLHDC8AQ8IYD2 350 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 CHCHD4Q8N4Q1 142 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 RAB42Q8N4Z0 105 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 DEFB119Q8N690 84 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 OR56A3Q8NH54 315 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 ZNF480Q8WV37 535 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 MAGEB10Q96LZ2 347 aaPredicted RBP10.12□□□□□ -0.79
LINC00173-203ENST00000480237 C3orf30Q96M34 536 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 SLC6A18Q96N87 628 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 FERD3LQ96RJ6 166 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 TUBB6Q9BUF5 446 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 CCDC106Q9BWC9 280 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 TUBB1Q9H4B7 451 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 CCDC177Q9NQR7 707 aaPredicted RBP10.12□□□□□ -0.79
LINC00173-203ENST00000480237 MRGBPQ9NV56 204 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 ARL8BQ9NVJ2 186 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 LNPEPQ9UIQ6 1025 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 RRP15Q9Y3B9 282 aaKnown RBP10.12□□□□□ -0.79
LINC00173-203ENST00000480237 RNF11Q9Y3C5 154 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 ASXL3Q9C0F0 2248 aa10.12□□□□□ -0.79
LINC00173-203ENST00000480237 ZNF839A8K0R7 811 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CAPN14A8MX76 684 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 E7EQ34 232 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 UBDO15205 165 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 HNRNPCL1O60812 293 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 TNFP01375 233 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 KRT6AP02538 564 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 KRT6BP04259 564 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 EZRP15311 586 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 EPORP19235 508 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 AOC1P19801 751 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CALB2P22676 271 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CCND1P24385 295 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 AK4P27144 223 aaPredicted RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 ACTR1BP42025 376 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 KRT6CP48668 564 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 ACTR1AP61163 376 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 STX1BP61266 288 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CTBSQ01459 385 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 IRF8Q02556 426 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SIGLEC14Q08ET2 396 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CHIT1Q13231 466 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 UAP1L1Q3KQV9 507 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 GGTA1PQ4G0N0 100 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 USP39Q53GS9 565 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 XKR7Q5GH72 579 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CWF19L1Q69YN2 538 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CAPRIN2Q6IMN6 1127 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SLC30A9Q6PML9 568 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SLC36A4Q6YBV0 504 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 HOMEZQ8IX15 550 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 TBC1D21Q8IYX1 336 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 PHACTR4Q8IZ21 702 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SLC22A18ASQ8N1D0 253 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 KLHDC7BQ96G42 594 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 NSL1Q96IY1 281 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CCT7Q99832 543 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 AKTIPQ9H8T0 292 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 CD320Q9NPF0 282 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 INTS7Q9NVH2 962 aaKnown RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SPATA6Q9NWH7 488 aaPredicted RBP10.11□□□□□ -0.79
LINC00173-203ENST00000480237 SPATA7Q9P0W8 599 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 GIMAP2Q9UG22 337 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 WDR37Q9Y2I8 494 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 HEBP2Q9Y5Z4 205 aa10.11□□□□□ -0.79
LINC00173-203ENST00000480237 PRR19A6NJB7 356 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 K7ESF4 209 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 KDM1AO60341 852 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 UGDHO60701 494 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 MTHFD1P11586 935 aaKnown RBP10.1□□□□□ -0.79
LINC00173-203ENST00000480237 LBPP18428 481 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 CD27P26842 260 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 RASSF2P50749 326 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 MXRA7P84157 204 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 ILF3Q12906 894 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00173-203ENST00000480237 KLF10Q13118 480 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 SQLEQ14534 574 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 CPSF6Q16630 551 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00173-203ENST00000480237 IMPG1Q17R60 797 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 KIF19Q2TAC6 998 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 XKR6Q5GH73 641 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 PRAMEF14Q5SWL7 426 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 SUSD1Q6UWL2 747 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 LARP4Q71RC2 724 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00173-203ENST00000480237 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 CADM4Q8NFZ8 388 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 HSPA12BQ96MM6 686 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 NECAB3Q96P71 396 aaPredicted RBP10.1□□□□□ -0.79
LINC00173-203ENST00000480237 IL17FQ96PD4 163 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 HBEGFQ99075 208 aa10.1□□□□□ -0.79
LINC00173-203ENST00000480237 RAB11FIP5Q9BXF6 653 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms