RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 OVCH1Q7RTY7 1134 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 LRRC6Q86X45 466 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 PRSS58Q8IYP2 241 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 MPP5Q8N3R9 675 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 ZADH2Q8N4Q0 377 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 RAB42Q8N4Z0 105 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 TTC29Q8NA56 475 aaPredicted RBP6.4□□□□□ -1.38
FN1-220ENST00000480024 DENND1AQ8TEH3 1009 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 TM9SF4Q92544 642 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 INPP5DQ92835 1189 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 SNRNP40Q96DI7 357 aaKnown RBP6.4□□□□□ -1.38
FN1-220ENST00000480024 MFSD3Q96ES6 412 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 SPSB2Q99619 263 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 ACAT2Q9BWD1 397 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 IL22Q9GZX6 179 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 ZNF552Q9H707 407 aaPredicted RBP6.4□□□□□ -1.38
FN1-220ENST00000480024 ZBTB20Q9HC78 741 aaPredicted RBP6.4□□□□□ -1.38
FN1-220ENST00000480024 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 ATP13A2Q9NQ11 1180 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 ASF1BQ9NVP2 202 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 BFARQ9NZS9 450 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 C5AR2Q9P296 337 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 CSAG2Q9Y5P2 127 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 MAU2Q9Y6X3 613 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 FAM169AQ9Y6X4 670 aa6.4□□□□□ -1.38
FN1-220ENST00000480024 CREBBPQ92793 2442 aa6.4□□□□□ -1.39
FN1-220ENST00000480024 ABCA12Q86UK0 2595 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 A0A0J9YVX5 310 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 TCRBV7S3A2A0A539 114 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 KPNA5O15131 536 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 PRICKLE3O43900 615 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 IPO13O94829 963 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 MED26O95402 600 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 EIF2S1P05198 315 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 F7P08709 466 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 ERVK-10P10266 1014 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 PIM1P11309 404 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 RPS3P23396 243 aaKnown RBP eCLIP6.39□□□□□ -1.392e-51■■□□□ 13.2
FN1-220ENST00000480024 VARSP26640 1264 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 FMO4P31512 558 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CXCR5P32302 372 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CCNFP41002 786 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 KCNJ1P48048 391 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 VPS41P49754 854 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 TSTA3Q13630 321 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 FASTKQ14296 549 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 HIF1AQ16665 826 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 TYSND1Q2T9J0 566 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 TUBB8Q3ZCM7 444 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 TCTE1Q5JU00 501 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 WASHC2DQ5SRD0 308 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 IRAK1BP1Q5VVH5 260 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 PRAMEF13Q5VWM6 474 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CRYBG3Q68DQ2 2970 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 FRMPD2BQ6IN97 320 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 MRNIPQ6NTE8 343 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CASC4Q6P4E1 433 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CUZD1Q86UP6 607 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 OR2L3Q8NG85 312 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 LPGAT1Q92604 370 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 RAD51AP1Q96B01 352 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CNDP1Q96KN2 507 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 FOPNLQ96NB1 174 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 ZNF285Q96NJ3 590 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 BIRC8Q96P09 236 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 WDR77Q9BQA1 342 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 TRIM56Q9BRZ2 755 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 CRB3Q9BUF7 120 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 SLC26A1Q9H2B4 701 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 WDR54Q9H977 334 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 MRM3Q9HC36 420 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 IL1RAPL1Q9NZN1 696 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 SPATA7Q9P0W8 599 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 STOX2Q9P2F5 926 aaPredicted RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
FN1-220ENST00000480024 NTNG1Q9Y2I2 539 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CRYL1Q9Y2S2 319 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 HS3ST3B1Q9Y662 390 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 CACNA1DQ01668 2161 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
FN1-220ENST00000480024 LRBAP50851 2863 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 LOC105369274A0A096LPK9 316 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 LOC102723532A0A0G2JNH3 316 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 A0A1W2PPV9 198 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 HYKKA2RU49 373 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 OR2A25A4D2G3 310 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 FITM1A5D6W6 292 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 ANKUB1A6NFN9 424 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 ARHGEF33A8MVX0 844 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 TARM1B6A8C7 271 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 E5RI56 91 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 H3BMM5 538 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 AP3B1O00203 1094 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 FFAR3O14843 346 aa6.38□□□□□ -1.39
FN1-220ENST00000480024 GPR42O15529 346 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms