RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 PEX12O00623 359 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 VPS4BO75351 444 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 FKBP9O95302 570 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 C1orf105O95561 183 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 IGHEP01854 428 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 ALAS2P22557 587 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 FMO4P31512 558 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 CCNFP41002 786 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 ARSFP54793 590 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 RAPSNQ13702 412 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 KCTD19Q17RG1 926 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 TYSND1Q2T9J0 566 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 ZC3H12BQ5HYM0 836 aaKnown RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 KIAA0930Q6ICG6 404 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 MRPL14Q6P1L8 145 aaKnown RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 FIGLAQ6QHK4 219 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 TTLL10Q6ZVT0 673 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 MCATQ8IVS2 390 aaKnown RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 OR2Y1Q8NGV0 311 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 MAGEC3Q8TD91 643 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 LPGAT1Q92604 370 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 FER1L6-AS2Q96M78 137 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 RAB17Q9H0T7 212 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 TSR3Q9UJK0 312 aaKnown RBP13.76□□□□□ -0.21
ATG4B-218ENST00000479554 VPS4AQ9UN37 437 aa13.76□□□□□ -0.21
ATG4B-218ENST00000479554 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 MAST4O15021 2626 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 A0A1B0GX78 115 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CLEC18AA5D8T8 446 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 KRT87PA6NCN2 255 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 H3BMM5 538 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 ATP8B1O43520 1251 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CNOT3O75175 753 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 NIPSNAP2O75323 286 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 SORBS2O94875 1100 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 ESR1P03372 595 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 PAMP19021 973 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 OGNP20774 298 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 PSMB5P28074 263 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 COILP38432 576 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 GRIA3P42263 894 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 GCGRP47871 477 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 DR1Q01658 176 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 GPS1Q13098 491 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CCSMST1Q4G0I0 132 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 TCTE1Q5JU00 501 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 BEND6Q5SZJ8 279 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 ARMC3Q5W041 872 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 FCRL6Q6DN72 434 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CCDC137Q6PK04 289 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CLEC18BQ6UXF7 455 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 EIF1ADQ8N9N8 165 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 TTC29Q8NA56 475 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CLEC1AQ8NC01 280 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 CLEC18CQ8NCF0 446 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 BIRC8Q96P09 236 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 TCF12Q99081 682 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
ATG4B-218ENST00000479554 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
ATG4B-218ENST00000479554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 TARM1B6A8C7 271 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 DSCR3O14972 297 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 TTI1O43156 1089 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 AVILO75366 819 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 KRT14P02533 472 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 ATP5DP30049 168 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 MAGEA6P43360 314 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 FOXL2P58012 376 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 CUL1Q13616 776 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 GRM7Q14831 915 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 DCAF10Q5QP82 559 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 JMJD6Q6NYC1 403 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 HMGCLL1Q8TB92 370 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.74□□□□□ -0.216e-11■■■■■ 51.9
ATG4B-218ENST00000479554 SLCO2A1Q92959 643 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 ZUFSPQ96AP4 578 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 PTERQ96BW5 349 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 SMAD5Q99717 465 aaKnown RBP13.74□□□□□ -0.21
ATG4B-218ENST00000479554 MIPEPQ99797 713 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 MFRPQ9BY79 579 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 SLAMF7Q9NQ25 335 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms