RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ATP6V1C1P21283 382 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CDH3P22223 829 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 STIP1P31948 543 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 MC4RP32245 332 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CA5AP35218 305 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 RANBP1P43487 201 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CTSCP53634 463 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 EIF3BP55884 814 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 HSD11B2P80365 405 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CACNG1Q06432 222 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ABRQ12979 859 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ATP1A4Q13733 1029 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SPARCL1Q14515 664 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 PTPRCAPQ14761 206 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 GPR19Q15760 415 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 PLEKHS1Q5SXH7 462 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 LYPLAL1Q5VWZ2 237 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 IZUMO3Q5VZ72 239 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 FAM198BQ6UWH4 519 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 TRPM8Q7Z2W7 1104 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CROCCP2Q86T23 111 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 LCA5Q86VQ0 697 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CARFQ8N187 725 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 NXPE1Q8N323 547 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 RNF10Q8N5U6 811 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 ZBTB2Q8N680 514 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ENDOVQ8N8Q3 282 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 FAM71DQ8N9W8 422 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 GLIS1Q8NBF1 620 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ACVR1CQ8NER5 493 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 OR13C4Q8NGS5 318 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 OR8K5Q8NH50 307 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 GSDMBQ8TAX9 411 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 MAIP1Q8WWC4 291 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 LCN9Q8WX39 176 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 TLCD1Q96CP7 247 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 THAP11Q96EK4 314 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 C5orf34Q96MH7 638 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 FCRL4Q96PJ5 515 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 MAP3K3Q99759 626 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SLC29A3Q9BZD2 475 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 FAM192AQ9GZU8 254 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 LACRTQ9GZZ8 138 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 RAB17Q9H0T7 212 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 VCXQ9H320 206 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SRMSQ9H3Y6 488 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 FAM96AQ9H5X1 160 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ARNT2Q9HBZ2 717 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ZBTB20Q9HC78 741 aaPredicted RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 SLAMF7Q9NQ25 335 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 FGF21Q9NSA1 209 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.44□□□□□ -1.38
VCP-205ENST00000479300 ZDHHC3Q9NYG2 299 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SMARCAL1Q9NZC9 954 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 SAMD15Q9P1V8 674 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 MAP10Q9P2G4 905 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 ANAPC5Q9UJX4 755 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 BLOC1S6Q9UL45 172 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 TMCO1Q9UM00 188 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 NFU1Q9UMS0 254 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 G3BP2Q9UN86 482 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 ZNF148Q9UQR1 794 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 PCDHGB7Q9Y5F8 929 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 NFS1Q9Y697 457 aa6.44□□□□□ -1.38
VCP-205ENST00000479300 CFAP20Q9Y6A4 193 aaKnown RBP6.44□□□□□ -1.38
VCP-205ENST00000479300 FER1L5A0AVI2 2057 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 DPPA5A6NC42 116 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 OR5K3A6NET4 321 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 ANKUB1A6NFN9 424 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 AP3B1O00203 1094 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 E2F3O00716 465 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 TMEM63AO94886 807 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 AP2A2O94973 939 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 ZBTB11O95625 1053 aaPredicted RBP6.43□□□□□ -1.38
VCP-205ENST00000479300 AP2A1O95782 977 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 IFNB1P01574 187 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 KLK3P07288 261 aaPredicted RBP6.43□□□□□ -1.38
VCP-205ENST00000479300 OR56A5P0C7T3 313 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 TPH1P17752 444 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 HPDP32754 393 aaPredicted RBP6.43□□□□□ -1.38
VCP-205ENST00000479300 ADRA1AP35348 466 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 RORAP35398 523 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 FDFT1P37268 417 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 NSG1P42857 185 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 CARSP49589 748 aaKnown RBP6.43□□□□□ -1.38
VCP-205ENST00000479300 PRLHRP49683 370 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 ZNF140P52738 457 aaPredicted RBP6.43□□□□□ -1.38
VCP-205ENST00000479300 FOXL2P58012 376 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 NCALDP61601 193 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 KLC1Q07866 573 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 ZNF844Q08AG5 666 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 CDH17Q12864 832 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 RPA4Q13156 261 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 POU6F1Q14863 301 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 TSNAXIP1Q2TAA8 658 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 GALNTL6Q49A17 601 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 ZNF789Q5FWF6 425 aa6.43□□□□□ -1.38
VCP-205ENST00000479300 AADACL2Q6P093 401 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms