RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GABARAPL1Q9H0R8 117 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 EXOSC4Q9NPD3 245 aaKnown RBP20.7■□□□□ 0.9
SDF4-206ENST00000478938 CSADQ9Y600 493 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 FZD9O00144 591 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 ALDH1A1P00352 501 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 NRG1Q02297 640 aaPredicted RBP20.7■□□□□ 0.9
SDF4-206ENST00000478938 DOC2BQ14184 412 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 LARS2Q15031 903 aaKnown RBP20.7■□□□□ 0.9
SDF4-206ENST00000478938 OR4D1Q15615 310 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 FBXO43Q4G163 708 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 METTL3Q86U44 580 aaKnown RBP20.7■□□□□ 0.9
SDF4-206ENST00000478938 RNF130Q86XS8 419 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 GPALPP1Q8IXQ4 340 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 PHACTR4Q8IZ21 702 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 TBL1YQ9BQ87 522 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 FICDQ9BVA6 458 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 ATXN3LQ9H3M9 355 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 ELOVL6Q9H5J4 265 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 IFT46Q9NQC8 304 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 ZNF490Q9ULM2 529 aaPredicted RBP20.7■□□□□ 0.9
SDF4-206ENST00000478938 CREG1O75629 220 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 GPC1P35052 558 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 CAP2P40123 477 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 RRAS2P62070 204 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 ERVK-8P63133 956 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 CACHD1Q5VU97 1274 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 HDDC2Q7Z4H3 204 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 RAB44Q7Z6P3 723 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 SLC44A2Q8IWA5 706 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 DNAJC22Q8N4W6 341 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 DCBLD1Q8N8Z6 715 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 OR8J3Q8NGG0 315 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 SENP8Q96LD8 212 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 OR5M11Q96RB7 305 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 ASPNQ9BXN1 380 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 FANCFQ9NPI8 374 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 PAK6Q9NQU5 681 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 SNTG1Q9NSN8 517 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 MRPS7Q9Y2R9 242 aaKnown RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 ANK1P16157 1881 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 E9PAM4 449 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 B4GALT5O43286 388 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 TRIM3O75382 744 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 PTPN5P54829 565 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 PCBP1Q15365 356 aaKnown RBP eCLIP20.69■□□□□ 0.92e-10■■■■□ 22.9
SDF4-206ENST00000478938 PDZK1Q5T2W1 519 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 KLHL17Q6TDP4 642 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 IFNL1Q8IU54 200 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 C7orf31Q8N865 590 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 ATG16L2Q8NAA4 619 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 KIF12Q96FN5 646 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 TSPAN17Q96FV3 270 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 MRPL45Q9BRJ2 306 aaKnown RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 MS4A7Q9GZW8 240 aaPredicted RBP20.69■□□□□ 0.9
SDF4-206ENST00000478938 SIRT5Q9NXA8 310 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 VPS9D1Q9Y2B5 631 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 KLK4Q9Y5K2 254 aa20.69■□□□□ 0.9
SDF4-206ENST00000478938 ZNF98A6NK75 572 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 FABP7O15540 132 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 PDE9AO76083 593 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 SCELO95171 688 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 ITGALP20701 1170 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 CLCN5P51795 746 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 KCNC3Q14003 757 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 ZNF273Q14593 569 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 LEXMQ3ZCV2 418 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 GLYR1Q49A26 553 aaPredicted RBP20.68■□□□□ 0.9
SDF4-206ENST00000478938 SMYD5Q6GMV2 418 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 GPR153Q6NV75 609 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 GDPD1Q8N9F7 314 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 BCL7CQ8WUZ0 217 aaPredicted RBP20.68■□□□□ 0.9
SDF4-206ENST00000478938 TEKT5Q96M29 485 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 ASB7Q9H672 318 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 PCDHGA6Q9Y5G7 932 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 FCER2P06734 321 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 MTHFD2P13995 350 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 MRPL19P49406 292 aaKnown RBP20.68■□□□□ 0.9
SDF4-206ENST00000478938 TPMTP51580 245 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 LCP2Q13094 533 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 C6orf136Q5SQH8 315 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 SNX20Q7Z614 316 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 GPR149Q86SP6 731 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 DEFB106AQ8N104 65 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 RACGAP1Q9H0H5 632 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 ACTL8Q9H568 366 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
SDF4-206ENST00000478938 OLA1Q9NTK5 396 aaKnown RBP20.68■□□□□ 0.9
SDF4-206ENST00000478938 THSD7AQ9UPZ6 1657 aa20.68■□□□□ 0.9
SDF4-206ENST00000478938 CLCA1A8K7I4 914 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 LACTBL1A8MY62 500 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 CLCNKAP51800 687 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 GBX2P52951 348 aaPredicted RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 RAB25P57735 213 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 NPRL3Q12980 569 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 XKR7Q5GH72 579 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 NOMO2Q5JPE7 1267 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 OTUD1Q5VV17 481 aaPredicted RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 GCNT7Q6ZNI0 430 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 ATCAYQ86WG3 371 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 STX19Q8N4C7 294 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms