RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TYSND1Q2T9J0 566 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 MUM1Q2TAK8 710 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 ANKRD20A4Q4UJ75 823 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 AGAP7PQ5VUJ5 663 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 KIAA0930Q6ICG6 404 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CNSTQ6PJW8 725 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 C2orf73Q8N5S3 287 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 Q8NA96 180 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 OR2L3Q8NG85 312 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 PPP4R1Q8TF05 950 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF285Q96NJ3 590 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 AGAP4Q96P64 663 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 MIPEPQ99797 713 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 WDR77Q9BQA1 342 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF552Q9H707 407 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 LZTFL1Q9NQ48 299 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 SOX13Q9UN79 622 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CDC14AQ9UNH5 594 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 KLHL20Q9Y2M5 609 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 DOPEY2Q9Y3R5 2298 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 TCP11X1B4DZS4 312 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 PCDH17O14917 1159 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 CEP104O60308 925 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 CHRM3P20309 590 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 MGAT1P26572 445 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 NMBRP28336 390 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 RPA3P35244 121 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 GRIA3P42263 894 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 CRADDP78560 199 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 NKG7Q16617 165 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 FCRL6Q6DN72 434 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 FAM20CQ8IXL6 584 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 GABPB2Q8TAK5 448 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 SMPDL3AQ92484 453 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 LPGAT1Q92604 370 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 MVB12AQ96EY5 273 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 ZFYVE21Q9BQ24 234 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 CRB3Q9BUF7 120 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 ZNF304Q9HCX3 659 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 INTS10Q9NVR2 710 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 SYBUQ9NX95 663 aa13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 ZNF282Q9UDV7 671 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 PLEKHB1Q9UF11 243 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 COPG1Q9Y678 874 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 RP1L1Q8IWN7 2480 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-209ENST00000478349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 MAGEB16A2A368 324 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 HYKKA2RU49 373 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 TXNDC9O14530 226 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 MAP2K7O14733 419 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 PKMP14618 531 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 ACPPP15309 386 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 FDXRP22570 491 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 FMO4P31512 558 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 EMP3P54852 163 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 AP2B1P63010 937 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 SIX1Q15475 284 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 C4orf17Q53FE4 359 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 PRR30Q53SZ7 412 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 Q6ZS92 163 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 RNF44Q7L0R7 432 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 LMNTD2Q8IXW0 634 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 OR9A1PQ8NGU1 263 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 PRR7Q8TB68 274 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 RERGQ96A58 199 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 MIEF2Q96C03 454 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 SNRNP40Q96DI7 357 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 MFSD3Q96ES6 412 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 CABS1Q96KC9 395 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 SPSB2Q99619 263 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 LHPPQ9H008 270 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 XAB2Q9HCS7 855 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 SLC6A20Q9NP91 592 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 MRPS30Q9NP92 439 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 C14orf105Q9NVL8 296 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 USP9YO00507 2555 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-209ENST00000478349 PRICKLE3O43900 615 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 USP1O94782 785 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 MATN4O95460 622 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 EIF2S1P05198 315 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CTSBP07858 339 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 UQCRHP07919 91 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 MLNP12872 115 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 ENO3P13929 434 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 FBLP22087 321 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CXCR2P25025 360 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 ABATP80404 500 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 PLEKHN1Q494U1 663 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CTSL3PQ5NE16 218 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms